RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TNPO1Q92973 898 aaKnown RBP13.53□□□□□ -0.24
BRCA1-225ENST00000586385 CASD1Q96PB1 797 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 CDCA3Q99618 268 aaPredicted RBP13.53□□□□□ -0.24
BRCA1-225ENST00000586385 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 BARHL2Q9NY43 387 aa13.53□□□□□ -0.24
BRCA1-225ENST00000586385 MAFBQ9Y5Q3 323 aaPredicted RBP13.53□□□□□ -0.24
BRCA1-225ENST00000586385 FNDC1Q4ZHG4 1894 aaPredicted RBP13.53□□□□□ -0.24
BRCA1-225ENST00000586385 EDIL3O43854 480 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 PDGFBP01127 241 aaPredicted RBP13.52□□□□□ -0.25
BRCA1-225ENST00000586385 CYP3A4P08684 503 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 CLCN3P51790 818 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 CRYBB1P53674 252 aaPredicted RBP13.52□□□□□ -0.25
BRCA1-225ENST00000586385 PTPN5P54829 565 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 PLCB3Q01970 1234 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 AP3B2Q13367 1082 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 RTN1Q16799 776 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 PTPN21Q16825 1174 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 SPOUT1Q5T280 376 aaKnown RBP13.52□□□□□ -0.25
BRCA1-225ENST00000586385 JAKMIP3Q5VZ66 844 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 PLPP4Q5VZY2 271 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 ANKRD54Q6NXT1 300 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 PLA2G4DQ86XP0 818 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
BRCA1-225ENST00000586385 NEK1Q96PY6 1258 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 APOL5Q9BWW9 433 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 ADAMTS10Q9H324 1103 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 ELAC1Q9H777 363 aaKnown RBP13.52□□□□□ -0.25
BRCA1-225ENST00000586385 AAASQ9NRG9 546 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 LZTS1Q9Y250 596 aa13.52□□□□□ -0.25
BRCA1-225ENST00000586385 KMT2EQ8IZD2 1858 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 IPO5O00410 1097 aaKnown RBP13.51□□□□□ -0.25
BRCA1-225ENST00000586385 GPR182O15218 404 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 LAG3P18627 525 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 ADCK5Q3MIX3 580 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 CLLU1OSQ5K130 101 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 PDE12Q6L8Q7 609 aaKnown RBP13.51□□□□□ -0.25
BRCA1-225ENST00000586385 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-225ENST00000586385 FEZF2Q8TBJ5 459 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 LENG9Q96B70 501 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 TMEM117Q9H0C3 514 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 ATP6V0A4Q9HBG4 840 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 FAM86C1Q9NVL1 165 aa13.51□□□□□ -0.25
BRCA1-225ENST00000586385 RBM28Q9NW13 759 aaKnown RBP13.51□□□□□ -0.25
BRCA1-225ENST00000586385 hCG_1984214I3L0E3 225 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 ZNF862O60290 1169 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 SP100P23497 879 aaPredicted RBP13.5□□□□□ -0.25
BRCA1-225ENST00000586385 AVPR2P30518 371 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 TECP42680 631 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 IRX6P78412 446 aaPredicted RBP13.5□□□□□ -0.25
BRCA1-225ENST00000586385 PKN1Q16512 942 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 MIS18BP1Q6P0N0 1132 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 LLGL2Q6P1M3 1020 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 KCNT2Q6UVM3 1135 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 TRMT1LQ7Z2T5 733 aaKnown RBP13.5□□□□□ -0.25
BRCA1-225ENST00000586385 SKAP1Q86WV1 359 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
BRCA1-225ENST00000586385 ZNF713Q8N859 430 aaPredicted RBP13.5□□□□□ -0.25
BRCA1-225ENST00000586385 BBXQ8WY36 941 aaPredicted RBP13.5□□□□□ -0.25
BRCA1-225ENST00000586385 ZNF668Q96K58 619 aaPredicted RBP13.5□□□□□ -0.25
BRCA1-225ENST00000586385 TCF25Q9BQ70 676 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
BRCA1-225ENST00000586385 ZBTB43O43298 467 aa13.49□□□□□ -0.25
BRCA1-225ENST00000586385 ZNF76P36508 570 aa13.49□□□□□ -0.25
BRCA1-225ENST00000586385 ZNF746Q6NUN9 644 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-225ENST00000586385 DHX32Q7L7V1 743 aaKnown RBP13.49□□□□□ -0.25
BRCA1-225ENST00000586385 ZNF598Q86UK7 904 aaKnown RBP13.49□□□□□ -0.25
BRCA1-225ENST00000586385 ECHDC2Q86YB7 292 aa13.49□□□□□ -0.25
BRCA1-225ENST00000586385 LRRC71Q8N4P6 559 aa13.49□□□□□ -0.25
BRCA1-225ENST00000586385 METTL13Q8N6R0 699 aa13.49□□□□□ -0.25
BRCA1-225ENST00000586385 ZNF577Q9BSK1 485 aa13.49□□□□□ -0.25
BRCA1-225ENST00000586385 SMOC2Q9H3U7 446 aa13.49□□□□□ -0.25
BRCA1-225ENST00000586385 KLF18A0A0U1RQI7 1052 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 ESYT2A0FGR8 921 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 C2orf71A6NGG8 1288 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 GOLGA8AA7E2F4 631 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 GOLGA8BA8MQT2 603 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 FGFR4P22455 802 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 ADD1P35611 737 aaKnown RBP13.48□□□□□ -0.25
BRCA1-225ENST00000586385 NLRP11P59045 1033 aaKnown RBP13.48□□□□□ -0.25
BRCA1-225ENST00000586385 UGCGQ16739 394 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 PFKFB3Q16875 520 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-225ENST00000586385 TSGA10IPQ3SY00 556 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 SLC39A11Q8N1S5 342 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 PRRX2Q99811 253 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 ZMYND12Q9H0C1 365 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 POMKQ9H5K3 350 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 ENTPD7Q9NQZ7 604 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 GABBR1Q9UBS5 961 aa13.48□□□□□ -0.25
BRCA1-225ENST00000586385 FSD2A1L4K1 749 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 C2CD4DB7Z1M9 353 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 CLASP2O75122 1294 aaKnown RBP13.47□□□□□ -0.25
BRCA1-225ENST00000586385 BRD1O95696 1058 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 CPA1P15085 419 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms