RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 PFKFB3Q16875 520 aaPredicted RBP10.56□□□□□ -0.72
SDF2-203ENST00000585749 CELF3Q5SZQ8 465 aaKnown RBP10.56□□□□□ -0.72
SDF2-203ENST00000585749 ADGRD1Q6QNK2 874 aa10.56□□□□□ -0.72
SDF2-203ENST00000585749 TMEM105Q8N8V8 129 aa10.56□□□□□ -0.72
SDF2-203ENST00000585749 SPPL3Q8TCT6 385 aa10.56□□□□□ -0.72
SDF2-203ENST00000585749 SUSD6Q92537 303 aa10.56□□□□□ -0.72
SDF2-203ENST00000585749 NKD2Q969F2 451 aaPredicted RBP10.56□□□□□ -0.72
SDF2-203ENST00000585749 RNF26Q9BY78 433 aaPredicted RBP10.56□□□□□ -0.72
SDF2-203ENST00000585749 GLT8D2Q9H1C3 349 aa10.56□□□□□ -0.72
SDF2-203ENST00000585749 RNPEPQ9H4A4 650 aa10.56□□□□□ -0.72
SDF2-203ENST00000585749 EHMT1Q9H9B1 1298 aa10.56□□□□□ -0.72
SDF2-203ENST00000585749 RIC8AQ9NPQ8 531 aa10.56□□□□□ -0.72
SDF2-203ENST00000585749 WDR87Q6ZQQ6 2873 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 ESYT2A0FGR8 921 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 MED19A0JLT2 244 aaPredicted RBP10.55□□□□□ -0.72
SDF2-203ENST00000585749 SPATA31C2B4DYI2 1134 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 PRPF3O43395 683 aaKnown RBP10.55□□□□□ -0.72
SDF2-203ENST00000585749 SORBS3O60504 671 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 GGPS1O95749 300 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
SDF2-203ENST00000585749 IFNAR1P17181 557 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 ADCY7P51828 1080 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 SP2Q02086 613 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 SEMA3FQ13275 785 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 AP3B2Q13367 1082 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 NAALADL2Q58DX5 795 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 FAM26DQ5JW98 314 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 FRMD5Q7Z6J6 570 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 RBM23Q86U06 439 aaKnown RBP10.55□□□□□ -0.72
SDF2-203ENST00000585749 ADSSL1Q8N142 457 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 CCDC12Q8WUD4 166 aaPredicted RBP10.55□□□□□ -0.72
SDF2-203ENST00000585749 GPRASP2Q96D09 838 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 ZNF274Q96GC6 653 aaPredicted RBP10.55□□□□□ -0.72
SDF2-203ENST00000585749 SPATA33Q96N06 139 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 EPAS1Q99814 870 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 SENP7Q9BQF6 1050 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 PCDHA6Q9UN73 950 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 PCDHA8Q9Y5H6 950 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 MRPL42Q9Y6G3 142 aaKnown RBP10.55□□□□□ -0.72
SDF2-203ENST00000585749 DOCK5Q9H7D0 1870 aa10.55□□□□□ -0.72
SDF2-203ENST00000585749 SMCO2A6NFE2 343 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 H3BRB1 525 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 DGKIO75912 1065 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 CLK2P49760 499 aaKnown RBP10.54□□□□□ -0.72
SDF2-203ENST00000585749 RBM10P98175 930 aaKnown RBP10.54□□□□□ -0.72
SDF2-203ENST00000585749 NEDD9Q14511 834 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 METTL7BQ6UX53 244 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 NLRX1Q86UT6 975 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 KLHL23Q8NBE8 558 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 VN1R2Q8NFZ6 395 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 POF1BQ8WVV4 589 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 PHKBQ93100 1093 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 ANO3Q9BYT9 981 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 ZMYND12Q9H0C1 365 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 TUT1Q9H6E5 874 aaKnown RBP10.54□□□□□ -0.72
SDF2-203ENST00000585749 MLXIPQ9HAP2 919 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
SDF2-203ENST00000585749 PDRG1Q9NUG6 133 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 RTEL1Q9NZ71 1219 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 PCDHGC5Q9Y5F6 944 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 NCOR2Q9Y618 2525 aa10.54□□□□□ -0.72
SDF2-203ENST00000585749 TK2O00142 265 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 ENPP3O14638 875 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 KRT37O76014 449 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 CHRNA1P02708 482 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 LGALS2P05162 132 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 GHRP10912 638 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 SREBF1P36956 1147 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 CCT2P78371 535 aaKnown RBP10.53□□□□□ -0.72
SDF2-203ENST00000585749 ADAM17P78536 824 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
SDF2-203ENST00000585749 MCTP2Q6DN12 878 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 GIMAP8Q8ND71 665 aaPredicted RBP10.53□□□□□ -0.72
SDF2-203ENST00000585749 CCDC148Q8NFR7 591 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 ATP8B4Q8TF62 1192 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 SLC26A6Q9BXS9 759 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 SETD4Q9NVD3 440 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 UBIAD1Q9Y5Z9 338 aa10.53□□□□□ -0.72
SDF2-203ENST00000585749 EP300Q09472 2414 aaPredicted RBP10.52□□□□□ -0.73
SDF2-203ENST00000585749 NOP56O00567 594 aaKnown RBP10.52□□□□□ -0.73
SDF2-203ENST00000585749 CPLX1O14810 134 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 MAFGO15525 162 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 KCNA2P16389 499 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 ITGB5P18084 799 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 GNA11P29992 359 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 MTMR1Q13613 665 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 NBR1Q14596 966 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 LPIN1Q14693 890 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 ANKRD1Q15327 319 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 CPLX2Q6PUV4 134 aaKnown RBP10.52□□□□□ -0.73
SDF2-203ENST00000585749 CYFIP1Q7L576 1253 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 ZBTB33Q86T24 672 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 TRIM22Q8IYM9 498 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 CMTR2Q8IYT2 770 aaKnown RBP10.52□□□□□ -0.73
SDF2-203ENST00000585749 FAM177A1Q8N128 213 aaPredicted RBP10.52□□□□□ -0.73
SDF2-203ENST00000585749 CRIPAKQ8N1N5 446 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 KREMEN2Q8NCW0 462 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 LMBR1Q8WVP7 490 aa10.52□□□□□ -0.73
SDF2-203ENST00000585749 LINC01599Q8WXQ3 324 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms