RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ZNF710Q8N1W2 664 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 NME8Q8N427 588 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 RAD54LQ92698 747 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 MTRQ99707 1265 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 SH2D3AQ9BRG2 576 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 FAM49AQ9H0Q0 323 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 DHX33Q9H6R0 707 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 SUGCTQ9HAC7 445 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 PDLIM7Q9NR12 457 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 KCND2Q9NZV8 630 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 KCNH3Q9ULD8 1083 aa16.23■□□□□ 0.19
SCAMP4-209ENST00000585335 A0A087WWV3 80 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 KIAA0355O15063 1070 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 RAG1P15918 1043 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 THPOP40225 353 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 CDC42EP1Q00587 391 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 HIC1Q14526 733 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 TPRNQ4KMQ1 711 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 IER5Q5VY09 327 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 RUFY4Q6ZNE9 571 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 CLEC17AQ6ZS10 378 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 RPAINQ86UA6 219 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 PDILTQ8N807 584 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 SYT2Q8N9I0 419 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 TMEM87AQ8NBN3 555 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 LARP4BQ92615 738 aaKnown RBP16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 CCDC34Q96HJ3 373 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 TIPINQ9BVW5 301 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 LRRC27Q9C0I9 530 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 MAGEF1Q9HAY2 307 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 USP25Q9UHP3 1055 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 TBX21Q9UL17 535 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 AKT3Q9Y243 479 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 ARID2Q68CP9 1835 aa16.22■□□□□ 0.19
SCAMP4-209ENST00000585335 KRT18P05783 430 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 PFKFB1P16118 471 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 CYP11B2P19099 503 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 CLCN3P51790 818 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 RBL2Q08999 1139 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 SV2BQ7L1I2 683 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 KCNK18Q7Z418 384 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 LRRC71Q8N4P6 559 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 DNAJB3Q8WWF6 145 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 PSPC1Q8WXF1 523 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 DHX58Q96C10 678 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 CTAGE1Q96RT6 745 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 PANK2Q9BZ23 570 aa16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-209ENST00000585335 IGKV6-21A0A0C4DH24 114 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 A0A1B0GVL5 298 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 POLR2DO15514 142 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 PARNO95453 639 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 CKBP12277 381 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 SELPP16109 830 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 SYKP43405 635 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 MRPS6P82932 125 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 AMPD3Q01432 767 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 DHX8Q14562 1220 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 MCM6Q14566 821 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 GPBP1Q86WP2 473 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 DHX38Q92620 1227 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 KIFAP3Q92845 792 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 ZBTB10Q96DT7 871 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 SCLT1Q96NL6 688 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 PPP1R12CQ9BZL4 782 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 BLOC1S4Q9NUP1 217 aa16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 SUCLA2Q9P2R7 463 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-209ENST00000585335 ALPK3Q96L96 1907 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 TRIP12Q14669 1992 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 A0A087X0B3 334 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 FAM237AA0A1B0GTK4 181 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 ASAP2O43150 1006 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 TIMP1P01033 207 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 SLC12A3P55017 1021 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 UBE2HP62256 183 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 MLLT1Q03111 559 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 TFDP1Q14186 410 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 MXD4Q14582 209 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 TRIM71Q2Q1W2 868 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 FAM102BQ5T8I3 360 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 LRRC8DQ7L1W4 858 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 KIAA0319LQ8IZA0 1049 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 TMEM199Q8N511 208 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 DRC1Q96MC2 740 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 LBHD1Q9BQE6 289 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 HPSEQ9Y251 543 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 TRPV2Q9Y5S1 764 aa16.19■□□□□ 0.18
SCAMP4-209ENST00000585335 TRIM43BA6NCK2 446 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 RSPH10B2B2RC85 870 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 VTNP04004 478 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 CTSHP09668 335 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 RSPH10BP0C881 870 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 GUCY2CP25092 1073 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 RFC2P35250 354 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 PPP2R5AQ15172 486 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms