RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 SH3RF1Q7Z6J0 888 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 GPBP1Q86WP2 473 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 RETREG2Q8NC44 543 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 MCPH1Q8NEM0 835 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 LMBR1Q8WVP7 490 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 ATP6V0A4Q9HBG4 840 aa12.96□□□□□ -0.33
CDRT1-207ENST00000583965 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-207ENST00000583965 SIP14410 1827 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 MROH7Q68CQ1 1323 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 IGKV6-21A0A0C4DH24 114 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 USO1O60763 962 aaKnown RBP12.95□□□□□ -0.34
CDRT1-207ENST00000583965 C22orf31O95567 290 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 RPLP2P05387 115 aaKnown RBP12.95□□□□□ -0.34
CDRT1-207ENST00000583965 KLRC1P26715 233 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 IGBP1P78318 339 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 DHX8Q14562 1220 aaKnown RBP12.95□□□□□ -0.34
CDRT1-207ENST00000583965 EMC2Q15006 297 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 FAM47CQ5HY64 1035 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 C1orf53Q5VUE5 145 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 MTHFD1LQ6UB35 978 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 NECAB2Q7Z6G3 386 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 TCP11Q8WWU5 503 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 PAGE5Q96GU1 130 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 ABHD8Q96I13 439 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 MTRQ99707 1265 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 C7orf25Q9BPX7 421 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-207ENST00000583965 C11orf49Q9H6J7 331 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 PDLIM7Q9NR12 457 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 SETD4Q9NVD3 440 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 TUBE1Q9UJT0 475 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 ODF2LQ9ULJ1 636 aa12.95□□□□□ -0.34
CDRT1-207ENST00000583965 MYMKA6NI61 221 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
CDRT1-207ENST00000583965 KRT18P05783 430 aaKnown RBP12.94□□□□□ -0.34
CDRT1-207ENST00000583965 TMOD1P28289 359 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 AFMP43652 599 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 DNM2P50570 870 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 CDK7P50613 346 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 SNX17Q15036 470 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 POSTNQ15063 836 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 ARSHQ5FYA8 562 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 MARCH8Q5T0T0 291 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 GDF6Q6KF10 455 aaPredicted RBP12.94□□□□□ -0.34
CDRT1-207ENST00000583965 TAF2Q6P1X5 1199 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 SLC39A5Q6ZMH5 540 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 TRAPPC12Q8WVT3 735 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 DDX12PQ92771 950 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 KIFAP3Q92845 792 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 DRC1Q96MC2 740 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 RUSC1Q9BVN2 902 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 TRIM9Q9C026 710 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 CLSTN2Q9H4D0 955 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 PCDHA2Q9Y5H9 948 aa12.94□□□□□ -0.34
CDRT1-207ENST00000583965 TANC1Q9C0D5 1861 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
CDRT1-207ENST00000583965 SMIM35A0A1B0GVV1 85 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 RTP1P59025 263 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 MDM2Q00987 491 aaPredicted RBP12.93□□□□□ -0.34
CDRT1-207ENST00000583965 GIT2Q14161 759 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 IER5Q5VY09 327 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 EFCAB12Q6NXP0 572 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 LINC01465Q8N7H1 131 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 DIS3LQ8TF46 1054 aaKnown RBP12.93□□□□□ -0.34
CDRT1-207ENST00000583965 STAMQ92783 540 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 SYAP1Q96A49 352 aaPredicted RBP12.93□□□□□ -0.34
CDRT1-207ENST00000583965 DNAJC19Q96DA6 116 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 PAWRQ96IZ0 340 aaKnown RBP12.93□□□□□ -0.34
CDRT1-207ENST00000583965 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 C17orf75Q9HAS0 396 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 XPNPEP1Q9NQW7 623 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 KCNG1Q9UIX4 513 aa12.93□□□□□ -0.34
CDRT1-207ENST00000583965 PVALEFA0A1B0GWK0 134 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 TLR3O15455 904 aaKnown RBP12.92□□□□□ -0.34
CDRT1-207ENST00000583965 ASAP2O43150 1006 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 TREHO43280 583 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 HIP1RO75146 1068 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 TBCAO75347 108 aaKnown RBP12.92□□□□□ -0.34
CDRT1-207ENST00000583965 SMC2O95347 1197 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 CYP2C9P11712 490 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 EN2P19622 333 aaPredicted RBP12.92□□□□□ -0.34
CDRT1-207ENST00000583965 ZNF131P52739 623 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 ASIC1P78348 528 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 CDC42EP1Q00587 391 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 DPYDQ12882 1025 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 PTK7Q13308 1070 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 HIC1Q14526 733 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 MXD4Q14582 209 aaPredicted RBP12.92□□□□□ -0.34
CDRT1-207ENST00000583965 PTGISQ16647 500 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 CCDC183Q5T5S1 534 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 FAM102BQ5T8I3 360 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 DYMQ7RTS9 669 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 ANKRD33Q7Z3H0 272 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 RPAINQ86UA6 219 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 SERINC5Q86VE9 423 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 CCDC65Q8IXS2 484 aa12.92□□□□□ -0.34
CDRT1-207ENST00000583965 GRAMD1CQ8IYS0 662 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms