RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 FAM86B1E9PN63 330 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 FGF18O76093 207 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 FAM86B2P0C5J1 330 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 ATP4AP20648 1035 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 MCM2P49736 904 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 CLK2P49760 499 aaKnown RBP23.22■■□□□ 1.31
SRSF1-206ENST00000583741 ERVFC1P60507 584 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 UBE3AQ05086 875 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 SLC24A5Q71RS6 500 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 TCEANC2Q96MN5 208 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 C1orf112Q9NSG2 853 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 TYW1Q9NV66 732 aaKnown RBP23.22■■□□□ 1.31
SRSF1-206ENST00000583741 RBM28Q9NW13 759 aaKnown RBP23.22■■□□□ 1.31
SRSF1-206ENST00000583741 MYO15AQ9UKN7 3530 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 BRPF3Q9ULD4 1205 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 V9GY48 417 aaPredicted RBP23.22■■□□□ 1.31
SRSF1-206ENST00000583741 WDR81Q562E7 1941 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 SMCO2A6NFE2 343 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 DHX15O43143 795 aaKnown RBP23.21■■□□□ 1.31
SRSF1-206ENST00000583741 AK2P54819 239 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 ZXDAP98168 799 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 EXOSC10Q01780 885 aaKnown RBP23.21■■□□□ 1.31
SRSF1-206ENST00000583741 AP3B2Q13367 1082 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 KIZQ2M2Z5 673 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 FAM160B1Q5W0V3 765 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 SYNE3Q6ZMZ3 975 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 TEX2Q8IWB9 1127 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 COLGALT1Q8NBJ5 622 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 PBXIP1Q96AQ6 731 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 OSMRQ99650 979 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 PHF7Q9BWX1 381 aaPredicted RBP23.21■■□□□ 1.31
SRSF1-206ENST00000583741 ZNF302Q9NR11 478 aa23.21■■□□□ 1.31
SRSF1-206ENST00000583741 C22orf31O95567 290 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 FGFR1P11362 822 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 RTN1Q16799 776 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 DUSP6Q16828 381 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 PDXDC2PQ6P474 469 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 NIPA1Q7RTP0 329 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 FAM228AQ86W67 206 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 THNSL1Q8IYQ7 743 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 SUSD6Q92537 303 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 RPGRIP1Q96KN7 1286 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 CWH43Q9H720 699 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 AAASQ9NRG9 546 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 BARHL2Q9NY43 387 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 DAXXQ9UER7 740 aaPredicted RBP23.2■■□□□ 1.3
SRSF1-206ENST00000583741 CFAP54Q96N23 3096 aa23.2■■□□□ 1.3
SRSF1-206ENST00000583741 IGLV3-22A0A075B6J6 115 aa23.19■■□□□ 1.3
SRSF1-206ENST00000583741 K7ELQ4 463 aaPredicted RBP23.19■■□□□ 1.3
SRSF1-206ENST00000583741 FSCN2O14926 492 aa23.19■■□□□ 1.3
SRSF1-206ENST00000583741 ZNF76P36508 570 aa23.19■■□□□ 1.3
SRSF1-206ENST00000583741 ZNF484Q5JVG2 852 aa23.19■■□□□ 1.3
SRSF1-206ENST00000583741 SWSAP1Q6NVH7 229 aa23.19■■□□□ 1.3
SRSF1-206ENST00000583741 CRYGNQ8WXF5 182 aa23.19■■□□□ 1.3
SRSF1-206ENST00000583741 CACNA1HO95180 2353 aa23.19■■□□□ 1.3
SRSF1-206ENST00000583741 hCG_1984214I3L0E3 225 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 GPR182O15218 404 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 ZBTB43O43298 467 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 FGD1P98174 961 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 APOBRQ0VD83 1088 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 ANKRD1Q15327 319 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 MIS18BP1Q6P0N0 1132 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 Q6ZUG5 572 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 PLA2G4DQ86XP0 818 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 ZNF713Q8N859 430 aaPredicted RBP23.18■■□□□ 1.3
SRSF1-206ENST00000583741 TMEM161AQ9NX61 479 aa23.18■■□□□ 1.3
SRSF1-206ENST00000583741 IPO5O00410 1097 aaKnown RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 ADAMTS3O15072 1205 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 GPR32O75388 356 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 VTNP04004 478 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 ATF7P17544 494 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 CRYBB1P53674 252 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 FAM189BP81408 668 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 KCNC3Q14003 757 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 JAKMIP3Q5VZ66 844 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 FAM43BQ6ZT52 329 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 CDCA3Q99618 268 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 ATP6V0A4Q9HBG4 840 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 FAM217BQ9NTX9 383 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 CDC27P30260 824 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 TOB2Q14106 344 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 DSC3Q14574 896 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 ODR4Q5SWX8 454 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 PLPP4Q5VZY2 271 aa23.17■■□□□ 1.3
SRSF1-206ENST00000583741 TRMT1LQ7Z2T5 733 aaKnown RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 RNF216Q9NWF9 866 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 MAFBQ9Y5Q3 323 aaPredicted RBP23.17■■□□□ 1.3
SRSF1-206ENST00000583741 GOLGA8AA7E2F4 631 aa23.16■■□□□ 1.3
SRSF1-206ENST00000583741 GOLGA8BA8MQT2 603 aa23.16■■□□□ 1.3
SRSF1-206ENST00000583741 LAG3P18627 525 aa23.16■■□□□ 1.3
SRSF1-206ENST00000583741 LRRC55Q6ZSA7 311 aa23.16■■□□□ 1.3
SRSF1-206ENST00000583741 SUGP1Q8IWZ8 645 aaKnown RBP23.16■■□□□ 1.3
SRSF1-206ENST00000583741 CKAP2LQ8IYA6 745 aa23.16■■□□□ 1.3
SRSF1-206ENST00000583741 FBXL6Q8N531 539 aa23.16■■□□□ 1.3
SRSF1-206ENST00000583741 METTL13Q8N6R0 699 aa23.16■■□□□ 1.3
SRSF1-206ENST00000583741 BBXQ8WY36 941 aaPredicted RBP23.16■■□□□ 1.3
SRSF1-206ENST00000583741 ELAC1Q9H777 363 aaKnown RBP23.16■■□□□ 1.3
SRSF1-206ENST00000583741 RNF19AQ9NV58 838 aa23.16■■□□□ 1.3
SRSF1-206ENST00000583741 HIDE1A8MVS5 230 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 CYP3A4P08684 503 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms