RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 FBXW5Q969U6 566 aa6.86□□□□□ -1.31
SMCHD1-207ENST00000581711 CBLCQ9ULV8 474 aa6.86□□□□□ -1.31
SMCHD1-207ENST00000581711 GCP02774 474 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 PYGMP11217 842 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 PTGS2P35354 604 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 JAM2P57087 298 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 RAB33AQ14088 237 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 CSRP2Q16527 193 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 ZNF662Q6ZS27 426 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 MRGPREQ86SM8 312 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 MTDHQ86UE4 582 aaKnown RBP6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 CKAP2LQ8IYA6 745 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 GPR150Q8NGU9 434 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 SREK1Q8WXA9 508 aaKnown RBP6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 MIEF2Q96C03 454 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
SMCHD1-207ENST00000581711 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 KCNK3O14649 394 aa6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 NUDT3O95989 172 aa6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 MMEP08473 750 aa6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 STAT3P40763 770 aa6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 MAN2A2P49641 1150 aa6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 MRPS21P82921 87 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 MBNL2Q5VZF2 373 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 PCDH19Q8TAB3 1148 aa6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 PMFBP1Q8TBY8 1022 aa6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 DNAJC2Q99543 621 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 CTDP1Q9Y5B0 961 aaPredicted RBP6.84□□□□□ -1.31
SMCHD1-207ENST00000581711 CCDC85CA6NKD9 419 aa6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 TRAF5O00463 557 aa6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 AQP7O14520 342 aa6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 CLASP2O75122 1294 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 ST5P78524 1137 aa6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 ADAM15Q13444 863 aa6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 SEC23AQ15436 765 aa6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 SF3A1Q15459 793 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 HAS1Q92839 578 aa6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 PCDHA8Q9Y5H6 950 aa6.83□□□□□ -1.32
SMCHD1-207ENST00000581711 RHOBTB3O94955 611 aa6.82□□□□□ -1.32
SMCHD1-207ENST00000581711 LMNAP02545 664 aaKnown RBP6.82□□□□□ -1.32
SMCHD1-207ENST00000581711 C16orf59Q7L2K0 433 aa6.82□□□□□ -1.32
SMCHD1-207ENST00000581711 SMURF1Q9HCE7 757 aa6.82□□□□□ -1.32
SMCHD1-207ENST00000581711 FAM20BO75063 409 aa6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 ATP2C1P98194 919 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 RBL2Q08999 1139 aa6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 CRY1Q16526 586 aa6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 MAMDC2Q7Z304 686 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 VRK3Q8IV63 474 aa6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 GSPT2Q8IYD1 628 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 BCL6BQ8N143 479 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 LRRC47Q8N1G4 583 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 SLC25A43Q8WUT9 341 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 ASB15Q8WXK1 588 aa6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 ZNF764Q96H86 408 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 GPR87Q9BY21 358 aa6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 VWA7Q9Y334 891 aa6.81□□□□□ -1.32
SMCHD1-207ENST00000581711 ARVCFO00192 962 aa6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 SRGAP2CP0DJJ0 459 aa6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 ADCY7P51828 1080 aa6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 ACAP1Q15027 740 aa6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 ELAVL1Q15717 326 aaKnown RBP6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 PRIMA1Q86XR5 153 aa6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 ST13P5Q8NFI4 369 aaPredicted RBP6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 LPPQ93052 612 aa6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 LENG9Q96B70 501 aa6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 PTGFRNQ9P2B2 879 aa6.8□□□□□ -1.32
SMCHD1-207ENST00000581711 XDHP47989 1333 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 CCDC66A2RUB6 948 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 MAFO75444 373 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 TM4SF20Q53R12 229 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 GAREM2Q75VX8 874 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 RHOUQ7L0Q8 258 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 NTN5Q8WTR8 489 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 PTPRN2Q92932 1015 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 ARMC5Q96C12 935 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 DRC1Q96MC2 740 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 HIRIP3Q9BW71 556 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 SLC6A15Q9H2J7 730 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 RIOX1Q9H6W3 641 aa6.79□□□□□ -1.32
SMCHD1-207ENST00000581711 PRAMEF22A3QJZ6 481 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 GSTA4O15217 222 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 GUCY1A3Q02108 690 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 MAP3K12Q12852 859 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 SERINC3Q13530 473 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 KLHDC10Q6PID8 442 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 HIPK4Q8NE63 616 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 SLC7A6OSQ96CW6 309 aaPredicted RBP6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 GBP4Q96PP9 640 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 GPHA2Q96T91 129 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 MLST8Q9BVC4 326 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 PACSIN3Q9UKS6 424 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 MSRB2Q9Y3D2 182 aa6.78□□□□□ -1.32
SMCHD1-207ENST00000581711 FAM221BA6H8Z2 402 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 MASP2O00187 686 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 APEX1P27695 318 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 RABGGTBP53611 331 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 LACTBP83111 547 aaPredicted RBP6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 SMAD3P84022 425 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 FAM47CQ5HY64 1035 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 RABL3Q5HYI8 236 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms