RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 RB1P06400 928 aa24■■□□□ 1.43
CSNK1D-215ENST00000580784 STAG3L1P0CL83 205 aa24■■□□□ 1.43
CSNK1D-215ENST00000580784 LETM2Q2VYF4 491 aa24■■□□□ 1.43
CSNK1D-215ENST00000580784 LINC01465Q8N7H1 131 aa24■■□□□ 1.43
CSNK1D-215ENST00000580784 OXER1Q8TDS5 423 aa24■■□□□ 1.43
CSNK1D-215ENST00000580784 KIAA1671Q9BY89 1806 aa24■■□□□ 1.43
CSNK1D-215ENST00000580784 ATG2AQ2TAZ0 1938 aa24■■□□□ 1.43
CSNK1D-215ENST00000580784 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 CCDC194A0A1B0GVG4 234 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 SLC37A4O43826 429 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 LARGE1O95461 756 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 SEC24BO95487 1268 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 XBP1P17861 261 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 GATMP50440 423 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 ME3Q16798 604 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 PAN2Q504Q3 1202 aaKnown RBP23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 FAM228AQ86W67 206 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 BANK1Q8NDB2 785 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 RDM1Q8NG50 284 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 ADAM2Q99965 735 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 UBE2ZQ9H832 354 aaPredicted RBP23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 ORC3Q9UBD5 711 aaPredicted RBP23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 LRFN2Q9ULH4 789 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 AKT3Q9Y243 479 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 RWDD3Q9Y3V2 267 aa23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 MRPL42Q9Y6G3 142 aaKnown RBP23.99■■□□□ 1.43
CSNK1D-215ENST00000580784 GRM6O15303 877 aa23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 FDPSP14324 419 aaKnown RBP23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 TMOD1P28289 359 aa23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 SARSP49591 514 aaKnown RBP23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 NLRP11P59045 1033 aaKnown RBP23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 ODR4Q5SWX8 454 aa23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 CMTR2Q8IYT2 770 aaKnown RBP23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 C11orf84Q9BUA3 381 aaPredicted RBP23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 RGS18Q9NS28 235 aa23.98■■□□□ 1.43
CSNK1D-215ENST00000580784 DENND3A2RUS2 1198 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 STBD1O95210 358 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 NEK4P51957 841 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 TARBP2Q15633 366 aaKnown RBP23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 FNDC1Q4ZHG4 1894 aaPredicted RBP23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 TIGD5Q53EQ6 642 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 TCEAL5Q5H9L2 206 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 PIK3AP1Q6ZUJ8 805 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 NEK8Q86SG6 692 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 ZNF668Q96K58 619 aaPredicted RBP23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 MAP7D2Q96T17 732 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 ADAMTS10Q9H324 1103 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 PCDHB7Q9Y5E2 793 aa23.97■■□□□ 1.43
CSNK1D-215ENST00000580784 TMEM150BA6NC51 233 aa23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 TBC1D8BQ0IIM8 1120 aa23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 EARS2Q5JPH6 523 aaKnown RBP23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 FAM43BQ6ZT52 329 aaPredicted RBP23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 SLC24A5Q71RS6 500 aa23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 WASF1Q92558 559 aa23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 SH2D3AQ9BRG2 576 aa23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 NIFKQ9BYG3 293 aaKnown RBP23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 C1orf112Q9NSG2 853 aa23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 SEPT9Q9UHD8 586 aaPredicted RBP23.96■■□□□ 1.43
CSNK1D-215ENST00000580784 C9IYK1 514 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 EML1O00423 815 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 KCNA5P22460 613 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 MTERF2Q49AM1 385 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 XKR3Q5GH77 459 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 PPP4R3AQ6IN85 833 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 GTF3C6Q969F1 213 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 PLVAPQ9BX97 442 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 NSUN3Q9H649 340 aaKnown RBP23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 ALG13Q9NP73 1137 aaKnown RBP23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 KCNMB3Q9NPA1 279 aa23.95■■□□□ 1.42
CSNK1D-215ENST00000580784 DDX11L8A8MPP1 907 aa23.94■■□□□ 1.42
CSNK1D-215ENST00000580784 CCNT1O60563 726 aaKnown RBP23.94■■□□□ 1.42
CSNK1D-215ENST00000580784 CENPBP07199 599 aaPredicted RBP23.94■■□□□ 1.42
CSNK1D-215ENST00000580784 DSC3Q14574 896 aa23.94■■□□□ 1.42
CSNK1D-215ENST00000580784 FAM102BQ5T8I3 360 aa23.94■■□□□ 1.42
CSNK1D-215ENST00000580784 FAM20AQ96MK3 541 aa23.94■■□□□ 1.42
CSNK1D-215ENST00000580784 CEP89Q96ST8 783 aa23.94■■□□□ 1.42
CSNK1D-215ENST00000580784 PLAGL2Q9UPG8 496 aa23.94■■□□□ 1.42
CSNK1D-215ENST00000580784 FAM205CA6NFA0 338 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 EIF5BO60841 1220 aaKnown RBP23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 GCFC2P16383 781 aaKnown RBP23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 EIF4BP23588 611 aaKnown RBP23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 GPC3P51654 580 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 FAM189BP81408 668 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 NR5A1Q13285 461 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 DRP2Q13474 957 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 HAS1Q92839 578 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 P2RX5Q93086 422 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 LMAN2LQ9H0V9 348 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 VAV3Q9UKW4 847 aa23.93■■□□□ 1.42
CSNK1D-215ENST00000580784 CSPG5O95196 566 aa23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 PSMC5P62195 406 aa23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 PPP2R5CQ13362 524 aa23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 CAMK1Q14012 370 aa23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 LEXMQ3ZCV2 418 aa23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 ANO5Q75V66 913 aa23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 ZNF710Q8N1W2 664 aa23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 NSUN7Q8NE18 718 aaKnown RBP23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.92■■□□□ 1.42
CSNK1D-215ENST00000580784 TBKBP1A7MCY6 615 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 JAK2O60674 1132 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms