RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MAFO75444 373 aaPredicted RBP15.87■□□□□ 0.13
SKA2-205ENST00000580541 NR1I2O75469 434 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 NPEPPSP55786 919 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 SNW1Q13573 536 aaKnown RBP15.87■□□□□ 0.13
SKA2-205ENST00000580541 DHX8Q14562 1220 aaKnown RBP15.87■□□□□ 0.13
SKA2-205ENST00000580541 NAALADL2Q58DX5 795 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 IER5Q5VY09 327 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 PLA2G4FQ68DD2 849 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 RINT1Q6NUQ1 792 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 MTHFD1LQ6UB35 978 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 SLC39A5Q6ZMH5 540 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 KCNK18Q7Z418 384 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 GPBP1Q86WP2 473 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 NME8Q8N427 588 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 METTL13Q8N6R0 699 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 SLC43A3Q8NBI5 491 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 KIFAP3Q92845 792 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 SYAP1Q96A49 352 aaPredicted RBP15.87■□□□□ 0.13
SKA2-205ENST00000580541 PAWRQ96IZ0 340 aaKnown RBP15.87■□□□□ 0.13
SKA2-205ENST00000580541 MTRQ99707 1265 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 DHX33Q9H6R0 707 aaKnown RBP15.87■□□□□ 0.13
SKA2-205ENST00000580541 DACT1Q9NYF0 836 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 TUBE1Q9UJT0 475 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 PCDHA2Q9Y5H9 948 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 A0A087WWV3 80 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 DCDC2CA8MYV0 355 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 COL6A1P12109 1028 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 LIG1P18858 919 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 GUCY2CP25092 1073 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 MXD4Q14582 209 aaPredicted RBP15.86■□□□□ 0.13
SKA2-205ENST00000580541 PTGISQ16647 500 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 EFCAB12Q6NXP0 572 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 C1orf186Q6ZWK4 172 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 LMBR1Q8WVP7 490 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 PAGE5Q96GU1 130 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 DRC1Q96MC2 740 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 TOX2Q96NM4 488 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 MAP7D2Q96T17 732 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 SUGCTQ9HAC7 445 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 C17orf75Q9HAS0 396 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 ODF2LQ9ULJ1 636 aa15.86■□□□□ 0.13
SKA2-205ENST00000580541 SMIM35A0A1B0GVV1 85 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 MBLAC1A4D2B0 266 aaPredicted RBP15.85■□□□□ 0.13
SKA2-205ENST00000580541 CCDC85CA6NKD9 419 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 ACTN4O43707 911 aaKnown RBP15.85■□□□□ 0.13
SKA2-205ENST00000580541 USO1O60763 962 aaKnown RBP15.85■□□□□ 0.13
SKA2-205ENST00000580541 SMC2O95347 1197 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 EN2P19622 333 aaPredicted RBP15.85■□□□□ 0.13
SKA2-205ENST00000580541 HOXC8P31273 242 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 CDK7P50613 346 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 EMC2Q15006 297 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 CNNM4Q6P4Q7 775 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 CCDC155Q8N6L0 562 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 IFT74Q96LB3 600 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 C7orf25Q9BPX7 421 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 GTPBP4Q9BZE4 634 aaKnown RBP15.85■□□□□ 0.13
SKA2-205ENST00000580541 COL4A3BPQ9Y5P4 624 aa15.85■□□□□ 0.13
SKA2-205ENST00000580541 IGKV6-21A0A0C4DH24 114 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 TMEM150BA6NC51 233 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 ZBTB42B2RXF5 422 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 GTPBP6O43824 516 aaPredicted RBP15.84■□□□□ 0.13
SKA2-205ENST00000580541 TBCAO75347 108 aaKnown RBP15.84■□□□□ 0.13
SKA2-205ENST00000580541 C22orf31O95567 290 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 CYP2C9P11712 490 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 SCP2P22307 547 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 ABCD1P33897 745 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 AFMP43652 599 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 MNX1P50219 401 aaPredicted RBP15.84■□□□□ 0.13
SKA2-205ENST00000580541 ADAM17P78536 824 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 PTK7Q13308 1070 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 PPP2R5AQ15172 486 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 FAM102BQ5T8I3 360 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 GDF6Q6KF10 455 aaPredicted RBP15.84■□□□□ 0.13
SKA2-205ENST00000580541 CCDC65Q8IXS2 484 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 SLC17A8Q8NDX2 589 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 PSPC1Q8WXF1 523 aaKnown RBP15.84■□□□□ 0.13
SKA2-205ENST00000580541 DDX12PQ92771 950 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 CEP89Q96ST8 783 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 PDLIM7Q9NR12 457 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 LARSQ9P2J5 1176 aaKnown RBP15.84■□□□□ 0.13
SKA2-205ENST00000580541 GRIN2DO15399 1336 aa15.84■□□□□ 0.13
SKA2-205ENST00000580541 PVALEFA0A1B0GWK0 134 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 M0QZ92 97 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 TREHO43280 583 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 CAND2O75155 1236 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 FAM13AO94988 1023 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 GAP43P17677 238 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 SMTNP53814 917 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 RTP1P59025 263 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 TFDP1Q14186 410 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 POSTNQ15063 836 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 NFKBIBQ15653 356 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 MARCH8Q5T0T0 291 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 ANKRD33Q7Z3H0 272 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 SERINC5Q86VE9 423 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 TRAPPC12Q8WVT3 735 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 SH2D3AQ9BRG2 576 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 HTATIP2Q9BUP3 242 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 TRIM9Q9C026 710 aa15.83■□□□□ 0.12
SKA2-205ENST00000580541 SUCLA2Q9P2R7 463 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms