RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 TIFAQ96CG3 184 aa18.36■□□□□ 0.53
IFT20-210ENST00000580357 CEP89Q96ST8 783 aa18.36■□□□□ 0.53
IFT20-210ENST00000580357 ZBED2Q9BTP6 218 aa18.36■□□□□ 0.53
IFT20-210ENST00000580357 PBX4Q9BYU1 374 aa18.36■□□□□ 0.53
IFT20-210ENST00000580357 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
IFT20-210ENST00000580357 GRXCR1A8MXD5 290 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 BMP15O95972 392 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 HSP90AA1P07900 732 aaKnown RBP18.35■□□□□ 0.53
IFT20-210ENST00000580357 RPA1P27694 616 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 CYP4A11Q02928 519 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 TMEM62Q0P6H9 643 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 XKR9Q5GH70 373 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 HAUS3Q68CZ6 603 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 DTHD1Q6ZMT9 781 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 HERC6Q8IVU3 1022 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 NACC1Q96RE7 527 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 SEMA6BQ9H3T3 888 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 SLC28A3Q9HAS3 691 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 LRWD1Q9UFC0 647 aa18.35■□□□□ 0.53
IFT20-210ENST00000580357 TET1Q8NFU7 2136 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 WDR81Q562E7 1941 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 VPS37CA5D8V6 355 aaPredicted RBP18.34■□□□□ 0.53
IFT20-210ENST00000580357 ASAP2O43150 1006 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 GPR32O75388 356 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 SYT1P21579 422 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 CLCN3P51790 818 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 NLRP11P59045 1033 aaKnown RBP18.34■□□□□ 0.53
IFT20-210ENST00000580357 PAK2Q13177 524 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 ARL6IP4Q66PJ3 421 aaKnown RBP18.34■□□□□ 0.53
IFT20-210ENST00000580357 LRRC71Q8N4P6 559 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 TCP11Q8WWU5 503 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 RAD9AQ99638 391 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 INO80BQ9C086 356 aaPredicted RBP18.34■□□□□ 0.53
IFT20-210ENST00000580357 DHX33Q9H6R0 707 aaKnown RBP18.34■□□□□ 0.53
IFT20-210ENST00000580357 WRAP73Q9P2S5 460 aaPredicted RBP18.34■□□□□ 0.53
IFT20-210ENST00000580357 PADI3Q9ULW8 664 aa18.34■□□□□ 0.53
IFT20-210ENST00000580357 POTEMA6NI47 508 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 ENPP3O14638 875 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 TLL1O43897 1013 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 RPS6KA5O75582 802 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 VTNP04004 478 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.52
IFT20-210ENST00000580357 NPEPPSP55786 919 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 MKRN4PQ13434 485 aaPredicted RBP18.33■□□□□ 0.52
IFT20-210ENST00000580357 NBR1Q14596 966 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 KIZQ2M2Z5 673 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 TCTN1Q2MV58 587 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 CATSPER3Q86XQ3 398 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 KCTD17Q8N5Z5 321 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 TOP1MTQ969P6 601 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 CCDC43Q96MW1 224 aaKnown RBP18.33■□□□□ 0.52
IFT20-210ENST00000580357 ADAMTS10Q9H324 1103 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 ZSCAN16Q9H4T2 348 aaPredicted RBP18.33■□□□□ 0.52
IFT20-210ENST00000580357 AGO3Q9H9G7 860 aaKnown RBP18.33■□□□□ 0.52
IFT20-210ENST00000580357 MTMR10Q9NXD2 777 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 SUCLA2Q9P2R7 463 aaPredicted RBP18.33■□□□□ 0.52
IFT20-210ENST00000580357 GINS2Q9Y248 185 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 STXBP5LQ9Y2K9 1186 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 INSL6Q9Y581 213 aa18.33■□□□□ 0.52
IFT20-210ENST00000580357 EVPLQ92817 2033 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 GJB5O95377 273 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 SPATA31C1P0DKV0 1188 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 EIF4BP23588 611 aaKnown RBP18.32■□□□□ 0.52
IFT20-210ENST00000580357 CD52P31358 61 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 ATP2C1P98194 919 aaPredicted RBP18.32■□□□□ 0.52
IFT20-210ENST00000580357 NFX1Q12986 1120 aaKnown RBP18.32■□□□□ 0.52
IFT20-210ENST00000580357 PLA2G4FQ68DD2 849 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 ZNF410Q86VK4 478 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 IGSF22Q8N9C0 903 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 GCOM2Q9BZD3 368 aaPredicted RBP18.32■□□□□ 0.52
IFT20-210ENST00000580357 OSBPL7Q9BZF2 842 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 ZNF576Q9H609 170 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 CDHR5Q9HBB8 845 aa18.32■□□□□ 0.52
IFT20-210ENST00000580357 DBR1Q9UK59 544 aaKnown RBP18.32■□□□□ 0.52
IFT20-210ENST00000580357 TMEM150BA6NC51 233 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 STX6O43752 255 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 DGAT1O75907 488 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 PBX2P40425 430 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 GPC3P51654 580 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 RABGGTBP53611 331 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 DEFB103AP81534 67 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 KRT79Q5XKE5 535 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
IFT20-210ENST00000580357 Q7L0L9 218 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 MYOCDQ8IZQ8 938 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 NLRP7Q8WX94 980 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 PSPC1Q8WXF1 523 aaKnown RBP18.31■□□□□ 0.52
IFT20-210ENST00000580357 SCLT1Q96NL6 688 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 SH2D3AQ9BRG2 576 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 ERVK-5Q9HDB9 667 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 ST3GAL5Q9UNP4 418 aa18.31■□□□□ 0.52
IFT20-210ENST00000580357 NOC2LQ9Y3T9 749 aaKnown RBP18.31■□□□□ 0.52
IFT20-210ENST00000580357 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.3■□□□□ 0.52
IFT20-210ENST00000580357 STAG3L1P0CL83 205 aa18.3■□□□□ 0.52
IFT20-210ENST00000580357 CCT6AP40227 531 aaKnown RBP18.3■□□□□ 0.52
IFT20-210ENST00000580357 MXD4Q14582 209 aaPredicted RBP18.3■□□□□ 0.52
IFT20-210ENST00000580357 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
IFT20-210ENST00000580357 OSMRQ99650 979 aa18.3■□□□□ 0.52
IFT20-210ENST00000580357 MTRQ99707 1265 aa18.3■□□□□ 0.52
IFT20-210ENST00000580357 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms