RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 COL9A3Q14050 684 aaPredicted RBP20.28■□□□□ 0.84
MKS1-209ENST00000580127 BMS1Q14692 1282 aaKnown RBP20.28■□□□□ 0.84
MKS1-209ENST00000580127 KIZQ2M2Z5 673 aa20.28■□□□□ 0.84
MKS1-209ENST00000580127 ADGRD2Q7Z7M1 963 aa20.28■□□□□ 0.84
MKS1-209ENST00000580127 CCDC60Q8IWA6 550 aaPredicted RBP20.28■□□□□ 0.84
MKS1-209ENST00000580127 ABI1Q8IZP0 508 aa20.28■□□□□ 0.84
MKS1-209ENST00000580127 REXO1Q8N1G1 1221 aaKnown RBP20.28■□□□□ 0.84
MKS1-209ENST00000580127 FBXL18Q96ME1 805 aa20.28■□□□□ 0.84
MKS1-209ENST00000580127 PHF7Q9BWX1 381 aaPredicted RBP20.28■□□□□ 0.84
MKS1-209ENST00000580127 CDHR5Q9HBB8 845 aa20.28■□□□□ 0.84
MKS1-209ENST00000580127 TYW1Q9NV66 732 aaKnown RBP20.28■□□□□ 0.84
MKS1-209ENST00000580127 LZTS1Q9Y250 596 aa20.28■□□□□ 0.84
MKS1-209ENST00000580127 MAFBQ9Y5Q3 323 aaPredicted RBP20.28■□□□□ 0.84
MKS1-209ENST00000580127 ATG2AQ2TAZ0 1938 aa20.27■□□□□ 0.84
MKS1-209ENST00000580127 ESYT2A0FGR8 921 aa20.27■□□□□ 0.84
MKS1-209ENST00000580127 DHX15O43143 795 aaKnown RBP20.27■□□□□ 0.84
MKS1-209ENST00000580127 GATMP50440 423 aa20.27■□□□□ 0.84
MKS1-209ENST00000580127 FAM102BQ5T8I3 360 aa20.27■□□□□ 0.84
MKS1-209ENST00000580127 BMP8AQ7Z5Y6 402 aa20.27■□□□□ 0.84
MKS1-209ENST00000580127 PBXIP1Q96AQ6 731 aa20.27■□□□□ 0.84
MKS1-209ENST00000580127 TCEANC2Q96MN5 208 aa20.27■□□□□ 0.84
MKS1-209ENST00000580127 ZMYND12Q9H0C1 365 aa20.27■□□□□ 0.84
MKS1-209ENST00000580127 MGEA5O60502 916 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 C22orf31O95567 290 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 ATF7P17544 494 aaPredicted RBP20.26■□□□□ 0.83
MKS1-209ENST00000580127 PPM1AP35813 382 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 CDC42EP1Q00587 391 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 TRIM67Q6ZTA4 783 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 TRMT1LQ7Z2T5 733 aaKnown RBP20.26■□□□□ 0.83
MKS1-209ENST00000580127 SUGP1Q8IWZ8 645 aaKnown RBP20.26■□□□□ 0.83
MKS1-209ENST00000580127 COLGALT1Q8NBJ5 622 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 OSMRQ99650 979 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 TMEM117Q9H0C3 514 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 NGRNQ9NPE2 291 aaKnown RBP20.26■□□□□ 0.83
MKS1-209ENST00000580127 BARX2Q9UMQ3 279 aaPredicted RBP20.26■□□□□ 0.83
MKS1-209ENST00000580127 AKT3Q9Y243 479 aa20.26■□□□□ 0.83
MKS1-209ENST00000580127 USP15Q9Y4E8 981 aaPredicted RBP20.26■□□□□ 0.83
MKS1-209ENST00000580127 KIAA1671Q9BY89 1806 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 IGLV3-22A0A075B6J6 115 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 LOC730098B7Z3J9 87 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 VTNP04004 478 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 ADD1P35611 737 aaKnown RBP20.25■□□□□ 0.83
MKS1-209ENST00000580127 MRE11P49959 708 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 NHLH1Q02575 133 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 PRR16Q569H4 304 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 EFCAB12Q6NXP0 572 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 TMEM40Q8WWA1 233 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 FAM217BQ9NTX9 383 aaPredicted RBP20.25■□□□□ 0.83
MKS1-209ENST00000580127 GABBR1Q9UBS5 961 aa20.25■□□□□ 0.83
MKS1-209ENST00000580127 FNDC1Q4ZHG4 1894 aaPredicted RBP20.24■□□□□ 0.83
MKS1-209ENST00000580127 TMEM221A6NGB7 291 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 WDR64B1ANS9 1081 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 ZBTB42B2RXF5 422 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 M0R296 226 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 PER2O15055 1255 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 PRPF3O43395 683 aaKnown RBP20.24■□□□□ 0.83
MKS1-209ENST00000580127 GPR32O75388 356 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 ATP4AP20648 1035 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 EIF4BP23588 611 aaKnown RBP20.24■□□□□ 0.83
MKS1-209ENST00000580127 CDC27P30260 824 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 NLRP11P59045 1033 aaKnown RBP20.24■□□□□ 0.83
MKS1-209ENST00000580127 PLCB3Q01970 1234 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 CBX2Q14781 532 aaPredicted RBP20.24■□□□□ 0.83
MKS1-209ENST00000580127 DUSP6Q16828 381 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 CCDC148Q8NFR7 591 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 CRYGNQ8WXF5 182 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 MRPS27Q92552 414 aaKnown RBP20.24■□□□□ 0.83
MKS1-209ENST00000580127 RPGRIP1Q96KN7 1286 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 ZNF558Q96NG5 402 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 SCLT1Q96NL6 688 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 PPP1R16BQ96T49 567 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 ENTPD7Q9NQZ7 604 aa20.24■□□□□ 0.83
MKS1-209ENST00000580127 CARNS1A5YM72 827 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 CDC45O75419 566 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 EOMESO95936 686 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 HOXB8P17481 243 aaPredicted RBP20.23■□□□□ 0.83
MKS1-209ENST00000580127 ERVFC1P60507 584 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 ZXDAP98168 799 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 ADCK5Q3MIX3 580 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 TMEM184AQ6ZMB5 413 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 FAM228AQ86W67 206 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 SPG21Q9NZD8 308 aa20.23■□□□□ 0.83
MKS1-209ENST00000580127 PLXNA4Q9HCM2 1894 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 FGFR1P11362 822 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 SFNP31947 248 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 CIITAP33076 1130 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 DNM2P50570 870 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 USP11P51784 963 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 DSC3Q14574 896 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 KCNT2Q6UVM3 1135 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 Q6ZUG5 572 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
MKS1-209ENST00000580127 TMC7Q7Z402 723 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 LRRC43Q8N309 656 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 TMEM87AQ8NBN3 555 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 RASGRP4Q8TDF6 673 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 RIT2Q99578 217 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 C22orf23Q9BZE7 217 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms