RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 STAT5BP51692 787 aa7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 ALDH6A1Q02252 535 aaKnown RBP7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 MAP3K12Q12852 859 aa7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 FOXL1Q12952 345 aa7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 SF3A1Q15459 793 aaKnown RBP7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 ARHGAP44Q17R89 818 aa7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 RTN4RL1Q86UN2 441 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 GPR135Q8IZ08 494 aa7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 BCL6BQ8N143 479 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 EXTL1Q92935 676 aa7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 FOXRED1Q96CU9 486 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 FOXB1Q99853 325 aa7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 PLD2O14939 933 aa7.21□□□□□ -1.26
SMCHD1-202ENST00000577300 ACRV1P26436 265 aa7.21□□□□□ -1.26
SMCHD1-202ENST00000577300 MECP2P51608 486 aaKnown RBP7.21□□□□□ -1.26
SMCHD1-202ENST00000577300 ZNF808Q8N4W9 903 aaPredicted RBP7.21□□□□□ -1.26
SMCHD1-202ENST00000577300 OR14K1Q8NGZ2 314 aa7.21□□□□□ -1.26
SMCHD1-202ENST00000577300 B4E1Z4 1266 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 NPIPB8E9PQR5 432 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 SLC26A4O43511 780 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 MSX2P35548 267 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 FNTBP49356 437 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 KLF10Q13118 480 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 ADGRE4PQ86SQ3 457 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 LILRB2Q8N423 598 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 PMFBP1Q8TBY8 1022 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 LPPQ93052 612 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 E2F7Q96AV8 911 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 FAM184BQ9ULE4 1060 aa7.2□□□□□ -1.26
SMCHD1-202ENST00000577300 PTH1RQ03431 593 aa7.19□□□□□ -1.26
SMCHD1-202ENST00000577300 GRM7Q14831 915 aa7.19□□□□□ -1.26
SMCHD1-202ENST00000577300 DDX53Q86TM3 631 aaKnown RBP7.19□□□□□ -1.26
SMCHD1-202ENST00000577300 C1orf210Q8IVY1 113 aa7.19□□□□□ -1.26
SMCHD1-202ENST00000577300 SHCBP1Q8NEM2 672 aa7.19□□□□□ -1.26
SMCHD1-202ENST00000577300 ERCC4Q92889 916 aaPredicted RBP7.19□□□□□ -1.26
SMCHD1-202ENST00000577300 CTDP1Q9Y5B0 961 aaPredicted RBP7.19□□□□□ -1.26
SMCHD1-202ENST00000577300 SESN2P58004 480 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 FNDC3BQ53EP0 1204 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 ZCCHC8Q6NZY4 707 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 KLHDC10Q6PID8 442 aa7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 IL17DQ8TAD2 202 aa7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 RABGGTAQ92696 567 aa7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 OSBPL2Q9H1P3 480 aa7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 SLITRK6Q9H5Y7 841 aa7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 AGO3Q9H9G7 860 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 TLR9Q9NR96 1032 aa7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 AURKAIP1Q9NWT8 199 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-202ENST00000577300 M0R2C6 588 aa7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 PRLP01236 227 aa7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 HIBADHP31937 336 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 IGFALSP35858 605 aa7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 HHEXQ03014 270 aa7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 ABHD18Q0P651 414 aa7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 ADAM15Q13444 863 aa7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 LSM12Q3MHD2 195 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 CACTINQ8WUQ7 758 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 CSRNP2Q9H175 543 aa7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 ING1Q9UK53 422 aaPredicted RBP7.17□□□□□ -1.26
SMCHD1-202ENST00000577300 H2AFYO75367 372 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 GLRX3O76003 335 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 ZNF202O95125 648 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 RAPGEF3O95398 923 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 KIF11P52732 1056 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 ROM1Q03395 351 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 RIN1Q13671 783 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 D2HGDHQ8N465 521 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 CHST14Q8NCH0 376 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 GFM2Q969S9 779 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 CLUHP3Q96NS8 147 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 MPHOSPH9Q99550 1183 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 ZNF703Q9H7S9 590 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 ACSS2Q9NR19 701 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 SAMD15Q9P1V8 674 aa7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 SAE1Q9UBE0 346 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-202ENST00000577300 DVL2O14641 736 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 NARSO43776 548 aaKnown RBP7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 KRT37O76014 449 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 ASLP04424 464 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 C1SP09871 688 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 ADCY7P51828 1080 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 DGCR2P98153 550 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 NFE2L2Q16236 605 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 IGFL4Q6B9Z1 124 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 SGMS1Q86VZ5 419 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 AMER2Q8N7J2 671 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 MAML3Q96JK9 1138 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 PLEKHG4BQ96PX9 1271 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 MENTQ9BUN1 341 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 SLC6A15Q9H2J7 730 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 CDK11AQ9UQ88 783 aaPredicted RBP7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 GIT1Q9Y2X7 761 aa7.15□□□□□ -1.26
SMCHD1-202ENST00000577300 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
SMCHD1-202ENST00000577300 CYP27B1O15528 508 aa7.14□□□□□ -1.27
SMCHD1-202ENST00000577300 MCM7P33993 719 aa7.14□□□□□ -1.27
SMCHD1-202ENST00000577300 RGS3P49796 1198 aa7.14□□□□□ -1.27
SMCHD1-202ENST00000577300 SLC6A3Q01959 620 aa7.14□□□□□ -1.27
SMCHD1-202ENST00000577300 FHL2Q14192 279 aa7.14□□□□□ -1.27
SMCHD1-202ENST00000577300 OR5AN1Q8NGI8 311 aa7.14□□□□□ -1.27
SMCHD1-202ENST00000577300 SLC7A6OSQ96CW6 309 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms