RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 COPS5Q92905 334 aa5.97□□□□□ -1.45
PRPF8-211ENST00000574728 MAP6Q96JE9 813 aa5.97□□□□□ -1.45
PRPF8-211ENST00000574728 RNPC3Q96LT9 517 aaKnown RBP5.97□□□□□ -1.45
PRPF8-211ENST00000574728 PTCHD1Q96NR3 888 aa5.97□□□□□ -1.45
PRPF8-211ENST00000574728 VPS33BQ9H267 617 aa5.97□□□□□ -1.45
PRPF8-211ENST00000574728 ERVK13-1Q9NX77 482 aa5.97□□□□□ -1.45
PRPF8-211ENST00000574728 TNFRSF10DQ9UBN6 386 aa5.97□□□□□ -1.45
PRPF8-211ENST00000574728 NOB1Q9ULX3 412 aaKnown RBP5.97□□□□□ -1.45
PRPF8-211ENST00000574728 PTCH2Q9Y6C5 1203 aa5.97□□□□□ -1.45
PRPF8-211ENST00000574728 MRPL42Q9Y6G3 142 aaKnown RBP5.97□□□□□ -1.45
PRPF8-211ENST00000574728 ADAMTSL1Q8N6G6 1762 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 TRBV23-1A0A0A0MS06 115 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 CCDC163A0A0D9SF12 145 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 TLDC2A0PJX2 215 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 SNAP23O00161 211 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 TOMM70O94826 608 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 TBC1D8O95759 1140 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 THBDP07204 575 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 RNASE1P07998 156 aaKnown RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 TRIM27P14373 513 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 VEGFAP15692 232 aaPredicted RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 PAMP19021 973 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 KLRK1P26718 216 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 RFX5P48382 616 aaPredicted RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 HK2P52789 917 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 CHRNEQ04844 493 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 CXCL9Q07325 125 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 SF1Q15637 639 aaKnown RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 ZNF792Q3KQV3 632 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 TMEM67Q5HYA8 995 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 YOD1Q5VVQ6 348 aaPredicted RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 HLA-DQA1Q5Y7H0 255 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 LMBR1LQ6UX01 489 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 DPP8Q6V1X1 898 aaPredicted RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 SCUBE1Q8IWY4 988 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 ANKS4BQ8N8V4 417 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 PDZD8Q8NEN9 1154 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 ARHGAP45Q92619 1136 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 TAF1DQ9H5J8 278 aaPredicted RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 RC3H2Q9HBD1 1191 aaKnown RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 SMC4Q9NTJ3 1288 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 MBNL3Q9NUK0 354 aaKnown RBP5.96□□□□□ -1.46
PRPF8-211ENST00000574728 ADAMTS6Q9UKP5 1117 aa5.96□□□□□ -1.46
PRPF8-211ENST00000574728 NPHP3-ACAD11A0A0J9YXS1 232 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 SHTN1A0MZ66 631 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 ZNF609O15014 1411 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 PPIP5K2O43314 1243 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 DLX3O60479 287 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 HSP90B1P14625 803 aaKnown RBP5.95□□□□□ -1.46
PRPF8-211ENST00000574728 GDNFP39905 211 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 KIR2DL1P43626 348 aaPredicted RBP5.95□□□□□ -1.46
PRPF8-211ENST00000574728 KIR2DL2P43627 348 aaPredicted RBP5.95□□□□□ -1.46
PRPF8-211ENST00000574728 SUMO1P63165 101 aaKnown RBP5.95□□□□□ -1.46
PRPF8-211ENST00000574728 RBM10P98175 930 aaKnown RBP5.95□□□□□ -1.46
PRPF8-211ENST00000574728 CCDC88AQ3V6T2 1871 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
PRPF8-211ENST00000574728 SLC4A10Q6U841 1118 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 NBPF11Q86T75 865 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 SPPL2CQ8IUH8 684 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 ABI1Q8IZP0 508 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 GPC2Q8N158 579 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 OXR1Q8N573 874 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 TMEM145Q8NBT3 493 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 FRS2Q8WU20 508 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 LINC01599Q8WXQ3 324 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 OSBP2Q969R2 916 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 DHRS4Q9BTZ2 278 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 G6PC3Q9BUM1 346 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 BICC1Q9H694 974 aaKnown RBP5.95□□□□□ -1.46
PRPF8-211ENST00000574728 GPRC5CQ9NQ84 441 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 CLEC1BQ9P126 229 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 XDHP47989 1333 aa5.95□□□□□ -1.46
PRPF8-211ENST00000574728 FITM1A5D6W6 292 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 FADS2P1A8MWK0 482 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 MEFVO15553 781 aaPredicted RBP5.94□□□□□ -1.46
PRPF8-211ENST00000574728 RAD17O75943 681 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 PLS3P13797 630 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 RAC2P15153 192 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 EPS15P42566 896 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 GMPSP49915 693 aaPredicted RBP5.94□□□□□ -1.46
PRPF8-211ENST00000574728 CYP4F3Q08477 520 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 SQSTM1Q13501 440 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 LAPTM5Q13571 262 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 SLC14A2Q15849 920 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 PRSS53Q2L4Q9 553 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 FAM209AQ5JX71 171 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 SLC35F1Q5T1Q4 408 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 ACBD5Q5T8D3 534 aaPredicted RBP5.94□□□□□ -1.46
PRPF8-211ENST00000574728 FOXB2Q5VYV0 432 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 IQCEQ6IPM2 695 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 C15orf52Q6ZUT6 534 aaKnown RBP5.94□□□□□ -1.46
PRPF8-211ENST00000574728 HOMER1Q86YM7 354 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 JAMLQ86YT9 394 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 ANKRD18AQ8IVF6 992 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 PPIL6Q8IXY8 311 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 DNAJC5GQ8N7S2 189 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 VGLL2Q8N8G2 317 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 KREMEN2Q8NCW0 462 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 SUPT20HQ8NEM7 779 aa5.94□□□□□ -1.46
PRPF8-211ENST00000574728 NPLOC4Q8TAT6 608 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms