RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 OTUD6AQ7L8S5 288 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 FOXD4L4Q8WXT5 416 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 ZNF668Q96K58 619 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 USP28Q96RU2 1077 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 PPP1R16BQ96T49 567 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 DHX33Q9H6R0 707 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 XPNPEP1Q9NQW7 623 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 ANKEF1Q9NU02 776 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 NOC2LQ9Y3T9 749 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 TRPV2Q9Y5S1 764 aa9.72□□□□□ -0.85
TRAPPC1-203ENST00000571739 ABHD14A-ACY1A0A1B0GW23 586 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 ENPP3O14638 875 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 F13A1P00488 732 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 RPLP2P05387 115 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 ZSCAN22P10073 491 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 ACTN1P12814 892 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 PDIA4P13667 645 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 MUTP22033 750 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 TMOD1P28289 359 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 CD52P31358 61 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 CCT6AP40227 531 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 PBX2P40425 430 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 GPC3P51654 580 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 IKBKEQ14164 716 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 KIZQ2M2Z5 673 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 POTEGQ6S5H5 508 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 TMCO2Q7Z6W1 182 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 KSR1Q8IVT5 923 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 ERMNQ8TAM6 284 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 TMEM143Q96AN5 459 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 PNMA5Q96PV4 448 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 NACC1Q96RE7 527 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 BMP2KQ9NSY1 1161 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 SUCLA2Q9P2R7 463 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 PADI3Q9ULW8 664 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 KIAA1024Q9UPX6 916 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 GINS2Q9Y248 185 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 SLC4A7Q9Y6M7 1214 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 SQORQ9Y6N5 450 aa9.71□□□□□ -0.86
TRAPPC1-203ENST00000571739 ZBBXA8MT70 800 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 E9PMD0 336 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 CSDE1O75534 798 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 BAIAP3O94812 1187 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 MARCKSP29966 332 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 RFC5P40937 340 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 NASPP49321 788 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 RABGGTBP53611 331 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 CRYBB1P53674 252 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 WDR5P61964 334 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 DEFB103AP81534 67 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 GRB10Q13322 594 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 SLC39A14Q15043 492 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 HYIQ5T013 277 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 TSHZ1Q6ZSZ6 1077 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 USP49Q70CQ1 688 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 KCNK18Q7Z418 384 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 USP38Q8NB14 1042 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 SNX29Q8TEQ0 813 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 LRRC15Q8TF66 581 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 SEPT8Q92599 483 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 OSMRQ99650 979 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 IFIH1Q9BYX4 1025 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 TMX1Q9H3N1 280 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 DDX19AQ9NUU7 478 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 FBXO2Q9UK22 296 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 DBR1Q9UK59 544 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 AKT3Q9Y243 479 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 PPME1Q9Y570 386 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 SIP14410 1827 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 TANC1Q9C0D5 1861 aa9.7□□□□□ -0.86
TRAPPC1-203ENST00000571739 A0A087WZ62 844 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 M0QZ92 97 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 MGEA5O60502 916 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 DGAT1O75907 488 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 BRD1O95696 1058 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 BMP15O95972 392 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 MYOGP15173 224 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 ATP2A2P16615 1042 aaKnown RBP9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 EIF4BP23588 611 aaKnown RBP9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 ARL2P36404 184 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 POLGP54098 1239 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 SMAD3P84022 425 aaKnown RBP9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 EMC2Q15006 297 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 FOXD4L6Q3SYB3 417 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 SPECC1Q5M775 1068 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 KRT79Q5XKE5 535 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 HAUS3Q68CZ6 603 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 FOXD4L3Q6VB84 417 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 FAM228AQ86W67 206 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 RHPN2Q8IUC4 686 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 LOXHD1Q8IVV2 1947 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 CRIPAKQ8N1N5 446 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 LINC00301Q8NCQ3 95 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 PHOSPHO2Q8TCD6 241 aa9.69□□□□□ -0.86
TRAPPC1-203ENST00000571739 PRPF31Q8WWY3 499 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms