RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PLIN2Q99541 437 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 POLR3CQ9BUI4 534 aaPredicted RBP7.82□□□□□ -1.16
SMG6-209ENST00000571442 ADAMTS10Q9H324 1103 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 DHX33Q9H6R0 707 aaKnown RBP7.82□□□□□ -1.16
SMG6-209ENST00000571442 ZSWIM4Q9H7M6 989 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 POLD4Q9HCU8 107 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 NRBP2Q9NSY0 501 aa7.82□□□□□ -1.16
SMG6-209ENST00000571442 TFIP11Q9UBB9 837 aaKnown RBP7.82□□□□□ -1.16
SMG6-209ENST00000571442 FBXO2Q9UK22 296 aaPredicted RBP7.82□□□□□ -1.16
SMG6-209ENST00000571442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 E9PMD0 336 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 LAD1O00515 517 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 MAFO75444 373 aaPredicted RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 CSDE1O75534 798 aaKnown RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 ARHGEF15O94989 841 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 FGBP02675 491 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 FGFR4P22455 802 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 RPA1P27694 616 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 CCT6AP40227 531 aaKnown RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 PBX2P40425 430 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 DEFB103AP81534 67 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 TBC1D8BQ0IIM8 1120 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 GRB10Q13322 594 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 PDIA5Q14554 519 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 KIZQ2M2Z5 673 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 TMEM266Q2M3C6 531 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 LRIT3Q3SXY7 679 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 XKR9Q5GH70 373 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 GPR153Q6NV75 609 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 DTHD1Q6ZMT9 781 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMG6-209ENST00000571442 Q7L0L9 218 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 RTN4RL1Q86UN2 441 aaPredicted RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 CCDC155Q8N6L0 562 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 NEK9Q8TD19 979 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 SNX29Q8TEQ0 813 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 TMEM143Q96AN5 459 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 CEP170P1Q96L14 293 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 RNPC3Q96LT9 517 aaKnown RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 OSMRQ99650 979 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 CELF4Q9BZC1 486 aaKnown RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 TMX1Q9H3N1 280 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 TUFT1Q9NNX1 390 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 GPRC5CQ9NQ84 441 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 DAXXQ9UER7 740 aaPredicted RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 LRWD1Q9UFC0 647 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 CEP131Q9UPN4 1083 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 GINS2Q9Y248 185 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 TRPV2Q9Y5S1 764 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 COL4A6Q14031 1691 aa7.81□□□□□ -1.16
SMG6-209ENST00000571442 LAMA2P24043 3122 aaKnown RBP7.81□□□□□ -1.16
SMG6-209ENST00000571442 KDM3AQ9Y4C1 1321 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 A0A087X0B3 334 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 MAGEB2O15479 319 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 MGEA5O60502 916 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 CAND2O75155 1236 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 MYOGP15173 224 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 CD52P31358 61 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 RFC2P35250 354 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 NASPP49321 788 aaPredicted RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 GPC3P51654 580 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 RABGGTBP53611 331 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 NLRP11P59045 1033 aaKnown RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 WDR5P61964 334 aaKnown RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 DNM1Q05193 864 aaKnown RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 EMC2Q15006 297 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 SLC39A14Q15043 492 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 TMEM119Q4V9L6 283 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 HYIQ5T013 277 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 ARL6IP4Q66PJ3 421 aaKnown RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 CNKSR3Q6P9H4 555 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 PSRC1Q6PGN9 363 aaPredicted RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 MAEAQ7L5Y9 396 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 SPRED2Q7Z698 418 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 FAM228AQ86W67 206 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 LINC00301Q8NCQ3 95 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 ASAP3Q8TDY4 903 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 BSNDQ8WZ55 320 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 EPSTI1Q96J88 318 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 CSRNP2Q9H175 543 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 ZSCAN16Q9H4T2 348 aaPredicted RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 ERVK-5Q9HDB9 667 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 ANKEF1Q9NU02 776 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 DDX19AQ9NUU7 478 aaKnown RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 AKT3Q9Y243 479 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 NOC2LQ9Y3T9 749 aaKnown RBP7.8□□□□□ -1.16
SMG6-209ENST00000571442 A0A0C4DFX4 3053 aa7.8□□□□□ -1.16
SMG6-209ENST00000571442 A0A087WZ62 844 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 ZBBXA8MT70 800 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 USO1O60763 962 aaKnown RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 PFKMP08237 780 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 GLRA2P23416 452 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 ARL2P36404 184 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 POLGP54098 1239 aaPredicted RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 KARSQ15046 597 aaKnown RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 ZRSR1Q15695 479 aaKnown RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 CABP7Q86V35 215 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 RPUSD2Q8IZ73 545 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms