RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 PRKCZQ05513 592 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 ALCAMQ13740 583 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 LAMC2Q13753 1193 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 CELF3Q5SZQ8 465 aaKnown RBP8.44□□□□□ -1.06
CDH13-214ENST00000569455 CENPPQ6IPU0 288 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 TTI2Q6NXR4 508 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 PPP4R3CPQ6ZMV5 832 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 CCDC60Q8IWA6 550 aaPredicted RBP8.44□□□□□ -1.06
CDH13-214ENST00000569455 DHX37Q8IY37 1157 aaKnown RBP8.44□□□□□ -1.06
CDH13-214ENST00000569455 MCPH1Q8NEM0 835 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 HPS3Q969F9 1004 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 MAML3Q96JK9 1138 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 FAM167AQ96KS9 214 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 DRC1Q96MC2 740 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 TINF2Q9BSI4 451 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 COL25A1Q9BXS0 654 aaPredicted RBP8.44□□□□□ -1.06
CDH13-214ENST00000569455 ABHD16BQ9H3Z7 469 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 NRBP2Q9NSY0 501 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.44□□□□□ -1.06
CDH13-214ENST00000569455 TBC1D7Q9P0N9 293 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 SEPT9Q9UHD8 586 aaPredicted RBP8.44□□□□□ -1.06
CDH13-214ENST00000569455 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 PCDHA2Q9Y5H9 948 aa8.44□□□□□ -1.06
CDH13-214ENST00000569455 MAFBQ9Y5Q3 323 aaPredicted RBP8.44□□□□□ -1.06
CDH13-214ENST00000569455 IGKV6D-21A0A0A0MT36 114 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 GSTTP1A0A1W2PQM5 241 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 RBM47A0AV96 593 aaKnown RBP8.43□□□□□ -1.06
CDH13-214ENST00000569455 TRIM49BA6NDI0 452 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 RSPH10B2B2RC85 870 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 KCNJ18B7U540 433 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 NKRFO15226 690 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDH13-214ENST00000569455 CALUO43852 315 aaPredicted RBP8.43□□□□□ -1.06
CDH13-214ENST00000569455 ADCY3O60266 1144 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 ZNF862O60290 1169 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 SORBS3O60504 671 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 HIP1RO75146 1068 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 GCNT3O95395 438 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 GH1P01241 217 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 IGHA2P01877 340 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 HMGCRP04035 888 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 OATP04181 439 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 RSPH10BP0C881 870 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
CDH13-214ENST00000569455 TCF7P36402 384 aaPredicted RBP8.43□□□□□ -1.06
CDH13-214ENST00000569455 SLC26A2P50443 739 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 STAT5BP51692 787 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 KCNJ12Q14500 433 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 LRRC41Q15345 812 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 LY6KQ17RY6 165 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 BMT2Q1RMZ1 405 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 SLC9C1Q4G0N8 1177 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 HSP90AA4PQ58FG1 418 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 ODR4Q5SWX8 454 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 UTP14CQ5TAP6 766 aaKnown RBP8.43□□□□□ -1.06
CDH13-214ENST00000569455 ANKRD40Q6AI12 368 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 CCDC62Q6P9F0 684 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 ANO5Q75V66 913 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 FAM178BQ8IXR5 827 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 SPC24Q8NBT2 197 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 AFAP1L1Q8TED9 768 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 KIFAP3Q92845 792 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 CEP170P1Q96L14 293 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 SPATA33Q96N06 139 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 SRRTQ9BXP5 876 aaKnown RBP8.43□□□□□ -1.06
CDH13-214ENST00000569455 SEMA6BQ9H3T3 888 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 BCAS3Q9H6U6 928 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 C17orf75Q9HAS0 396 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 ATP6V0A4Q9HBG4 840 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 IMPACTQ9P2X3 320 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 LIMA1Q9UHB6 759 aaKnown RBP8.43□□□□□ -1.06
CDH13-214ENST00000569455 PCDHB13Q9Y5F0 798 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 ZSWIM8A7E2V4 1837 aa8.43□□□□□ -1.06
CDH13-214ENST00000569455 UNC80Q8N2C7 3258 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 A0A1B0GTH6 734 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 H0YCG3 227 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 PDXKO00764 312 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 MSCO60682 206 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 LGR5O75473 907 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 STBD1O95210 358 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 ARIH2O95376 493 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 GNA14O95837 355 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 PLS3P13797 630 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 RPL13P26373 211 aaKnown RBP8.42□□□□□ -1.06
CDH13-214ENST00000569455 ABCD1P33897 745 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 RFC5P40937 340 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 SMTNP53814 917 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 POLGP54098 1239 aaPredicted RBP8.42□□□□□ -1.06
CDH13-214ENST00000569455 PMS1P54277 932 aaKnown RBP8.42□□□□□ -1.06
CDH13-214ENST00000569455 NPEPPSP55786 919 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 GSDMDP57764 484 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 FKBP3Q00688 224 aaKnown RBP8.42□□□□□ -1.06
CDH13-214ENST00000569455 CAP1Q01518 475 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 KNOP1Q1ED39 458 aaKnown RBP8.42□□□□□ -1.06
CDH13-214ENST00000569455 EDRF1Q3B7T1 1238 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 TCP11X2Q5H9J9 407 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 FAM102BQ5T8I3 360 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 MAP3K21Q5TCX8 1036 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 MFSD14CQ5VZR4 134 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 PLA2G4FQ68DD2 849 aa8.42□□□□□ -1.06
CDH13-214ENST00000569455 IQSEC1Q6DN90 963 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms