RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 AUTS2Q8WXX7 1259 aa16.93■□□□□ 0.3
USB1-214ENST00000568848 BRPF3Q9ULD4 1205 aa16.93■□□□□ 0.3
USB1-214ENST00000568848 SQORQ9Y6N5 450 aa16.93■□□□□ 0.3
USB1-214ENST00000568848 IGKV6D-21A0A0A0MT36 114 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 C2CD4DB7Z1M9 353 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 GPR32O75388 356 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 C22orf31O95567 290 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 CA8P35219 290 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 DSC3Q14574 896 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 LONRF3Q496Y0 759 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 METTL13Q8N6R0 699 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 KREMEN2Q8NCW0 462 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 CASD1Q96PB1 797 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 POMKQ9H5K3 350 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 ATP6V0A4Q9HBG4 840 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 ZNF302Q9NR11 478 aa16.92■□□□□ 0.3
USB1-214ENST00000568848 MEIS1O00470 390 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 DHX15O43143 795 aaKnown RBP16.91■□□□□ 0.3
USB1-214ENST00000568848 CSDE1O75534 798 aaKnown RBP16.91■□□□□ 0.3
USB1-214ENST00000568848 BRD1O95696 1058 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 ADCY7P51828 1080 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 FUT2Q10981 343 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 CLLU1OSQ5K130 101 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 CREB3L3Q68CJ9 461 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 SLC24A5Q71RS6 500 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 ASCL5Q7RTU5 278 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 TMEM105Q8N8V8 129 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 MRPS27Q92552 414 aaKnown RBP16.91■□□□□ 0.3
USB1-214ENST00000568848 GJA10Q969M2 543 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 RIC8AQ9NPQ8 531 aa16.91■□□□□ 0.3
USB1-214ENST00000568848 V9GY48 417 aaPredicted RBP16.91■□□□□ 0.3
USB1-214ENST00000568848 SMCO2A6NFE2 343 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 HBP1O60381 514 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 ATF7P17544 494 aaPredicted RBP16.9■□□□□ 0.3
USB1-214ENST00000568848 ZNF76P36508 570 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 KCNT2Q6UVM3 1135 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 TMEM173Q86WV6 379 aaPredicted RBP16.9■□□□□ 0.3
USB1-214ENST00000568848 CKAP2LQ8IYA6 745 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 NME8Q8N427 588 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 RASGRP4Q8TDF6 673 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 TMEM87BQ96K49 555 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 AAASQ9NRG9 546 aa16.9■□□□□ 0.3
USB1-214ENST00000568848 MYH9P35579 1960 aaKnown RBP16.89■□□□□ 0.3
USB1-214ENST00000568848 IGLV3-22A0A075B6J6 115 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 MAFGO15525 162 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 ST18O60284 1047 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 CDC27P30260 824 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 SREBF1P36956 1147 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 METAP2P50579 478 aaKnown RBP eCLIP16.89■□□□□ 0.29
USB1-214ENST00000568848 UBE3AQ05086 875 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 AAMPQ13685 434 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 HELQQ8TDG4 1101 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 RIPOR3Q96MK2 946 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 C1orf112Q9NSG2 853 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 TMEM161AQ9NX61 479 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 HCFC2Q9Y5Z7 792 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 WDR87Q6ZQQ6 2873 aa16.89■□□□□ 0.29
USB1-214ENST00000568848 FAM186AA6NE01 2351 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 WDR81Q562E7 1941 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 TMEM150BA6NC51 233 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 GPR182O15218 404 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 CPA1P15085 419 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 LAG3P18627 525 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 LIFRP42702 1097 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 CLK2P49760 499 aaKnown RBP16.88■□□□□ 0.29
USB1-214ENST00000568848 CRYBB1P53674 252 aaPredicted RBP16.88■□□□□ 0.29
USB1-214ENST00000568848 NLRP11P59045 1033 aaKnown RBP16.88■□□□□ 0.29
USB1-214ENST00000568848 FAM189BP81408 668 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 DRP2Q13474 957 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 UGCGQ16739 394 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 RARS2Q5T160 578 aaKnown RBP16.88■□□□□ 0.29
USB1-214ENST00000568848 FAM160B1Q5W0V3 765 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 APOA5Q6Q788 366 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 BCL7CQ8WUZ0 217 aaPredicted RBP16.88■□□□□ 0.29
USB1-214ENST00000568848 SH2D3AQ9BRG2 576 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 FAM217BQ9NTX9 383 aaPredicted RBP16.88■□□□□ 0.29
USB1-214ENST00000568848 GABBR1Q9UBS5 961 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
USB1-214ENST00000568848 C2orf71A6NGG8 1288 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 MEIS3P2A8K0S8 358 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 CLASP2O75122 1294 aaKnown RBP16.87■□□□□ 0.29
USB1-214ENST00000568848 CALM1P0DP23 149 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 CALM2P0DP24 149 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 CALM3P0DP25 149 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 EPCAMP16422 314 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 RTN1Q16799 776 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 ZNF484Q5JVG2 852 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 MIS18BP1Q6P0N0 1132 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 TMEM184AQ6ZMB5 413 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 ECHDC2Q86YB7 292 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 LPPQ93052 612 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 ZNF558Q96NG5 402 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 ESYT1Q9BSJ8 1104 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 ADAMTS10Q9H324 1103 aa16.87■□□□□ 0.29
USB1-214ENST00000568848 NAP1L2Q9ULW6 460 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms