RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 RIC8AQ9NPQ8 531 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 FSD2A1L4K1 749 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 HIDE1A8MVS5 230 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 DDX39AO00148 427 aaKnown RBP15.23■□□□□ 0.03
COMMD4-214ENST00000566230 SLC27A2O14975 620 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 REC8O95072 547 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 PLCB3Q01970 1234 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 ZNF484Q5JVG2 852 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 PLPP4Q5VZY2 271 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 FAM228AQ86W67 206 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 CCDC60Q8IWA6 550 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-214ENST00000566230 RASGRP4Q8TDF6 673 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 MRPS27Q92552 414 aaKnown RBP15.23■□□□□ 0.03
COMMD4-214ENST00000566230 PPP1R16BQ96T49 567 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 ANO3Q9BYT9 981 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 ATP6V0A4Q9HBG4 840 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 RNF19AQ9NV58 838 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-214ENST00000566230 TMEM161AQ9NX61 479 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 CDH22Q9UJ99 828 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 LZTS1Q9Y250 596 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 COL1A2P08123 1366 aa15.23■□□□□ 0.03
COMMD4-214ENST00000566230 BACH1O14867 736 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 GPR182O15218 404 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 DHX15O43143 795 aaKnown RBP15.22■□□□□ 0.03
COMMD4-214ENST00000566230 GFRA3O60609 400 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
COMMD4-214ENST00000566230 GPR32O75388 356 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 C22orf31O95567 290 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 FOSP01100 380 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-214ENST00000566230 LAG3P18627 525 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 CRYBB1P53674 252 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-214ENST00000566230 KIZQ2M2Z5 673 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 ODR4Q5SWX8 454 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 FAM160B1Q5W0V3 765 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 LLGL2Q6P1M3 1020 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 CASD1Q96PB1 797 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 OSMRQ99650 979 aa15.22■□□□□ 0.03
COMMD4-214ENST00000566230 ELAC1Q9H777 363 aaKnown RBP15.22■□□□□ 0.03
COMMD4-214ENST00000566230 CNTNAP5Q8WYK1 1306 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 VTNP04004 478 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 SP100P23497 879 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-214ENST00000566230 SREBF1P36956 1147 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 NAPAP54920 295 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 FUT2Q10981 343 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 SWSAP1Q6NVH7 229 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 PDXDC2PQ6P474 469 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 KCNT2Q6UVM3 1135 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 MICU3Q86XE3 530 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 ATOH1Q92858 354 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-214ENST00000566230 RIPOR3Q96MK2 946 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 TCF25Q9BQ70 676 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 ZNF302Q9NR11 478 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 MYO15AQ9UKN7 3530 aa15.21■□□□□ 0.03
COMMD4-214ENST00000566230 FAM86B1E9PN63 330 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 H0Y858 1186 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 FAM86B2P0C5J1 330 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 SRGAP2BP0DMP2 458 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 HOXB8P17481 243 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-214ENST00000566230 PBX3P40426 434 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 CLK2P49760 499 aaKnown RBP15.2■□□□□ 0.02
COMMD4-214ENST00000566230 ADCY7P51828 1080 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 KRT32Q14532 448 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 NIPA1Q7RTP0 329 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 SGMS1Q86VZ5 419 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 TEX2Q8IWB9 1127 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 KREMEN2Q8NCW0 462 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 NGRNQ9NPE2 291 aaKnown RBP15.2■□□□□ 0.02
COMMD4-214ENST00000566230 ENTPD7Q9NQZ7 604 aa15.2■□□□□ 0.02
COMMD4-214ENST00000566230 PUF60Q9UHX1 559 aaKnown RBP15.2■□□□□ 0.02
COMMD4-214ENST00000566230 V9GY48 417 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-214ENST00000566230 VPS13AQ96RL7 3174 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 IGLV3-22A0A075B6J6 115 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 SMCO2A6NFE2 343 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 PPP1R18Q6NYC8 613 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 MIS18BP1Q6P0N0 1132 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 APOA5Q6Q788 366 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 ZBTB33Q86T24 672 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 PLA2G4DQ86XP0 818 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 KCNB2Q92953 911 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 ZNF558Q96NG5 402 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 IRF2BPLQ9H1B7 796 aa15.19■□□□□ 0.02
COMMD4-214ENST00000566230 MAFBQ9Y5Q3 323 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-214ENST00000566230 GVINP1Q7Z2Y8 2422 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 C2CD4DB7Z1M9 353 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 ADAMTS3O15072 1205 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 GALR2O43603 387 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-214ENST00000566230 BRD1O95696 1058 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 HMGB1P09429 215 aaKnown RBP15.18■□□□□ 0.02
COMMD4-214ENST00000566230 HSPA4P34932 840 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 ZNF76P36508 570 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 AP3B2Q13367 1082 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 CLLU1OSQ5K130 101 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 TRMT1LQ7Z2T5 733 aaKnown RBP15.18■□□□□ 0.02
COMMD4-214ENST00000566230 TMC7Q7Z402 723 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 ECHDC2Q86YB7 292 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 METTL13Q8N6R0 699 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms