RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SKIV2L2P42285 1042 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 TRAPPC10P48553 1259 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 EMP3P54852 163 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 SLC7A5Q01650 507 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MIGA2Q7L4E1 593 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 RAB11FIP4Q86YS3 637 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PASD1Q8IV76 773 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 RPS6KC1Q96S38 1066 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DRC3Q9H069 523 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DBNLQ9UJU6 430 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 DEPDC5O75140 1603 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 SHBGP04278 402 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ASLP04424 464 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 ITGA6P23229 1130 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TMEM53Q6P2H8 277 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KSR2Q6VAB6 950 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NDUFAF2Q8N183 169 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 CFAP57Q96MR6 1250 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 SMAD5Q99717 465 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 STMN4Q9H169 189 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 CARD9Q9H257 536 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TBCCD1Q9NVR7 557 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DLGAP2Q9P1A6 1054 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PLEKHG1Q9ULL1 1385 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 SMIM31A0A1B0GVY4 71 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DCDC2CA8MYV0 355 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MOCS3O95396 460 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 HSD17B3P37058 310 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 CCNFP41002 786 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 GPSM2P81274 684 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 UBE2R2Q712K3 238 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 SCUBE1Q8IWY4 988 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 NELFCDQ8IXH7 590 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 SMC1BQ8NDV3 1235 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 DHTKD1Q96HY7 919 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 GPR101Q96P66 508 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 HDAC9Q9UKV0 1011 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KIF20BQ96Q89 1820 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 FAM205CA6NFA0 338 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 CES2O00748 559 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 E2F6O75461 281 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MYBL1P10243 752 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 EEF1DP29692 281 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 EIF3BP55884 814 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 MAGOHP61326 146 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 TCP11X2Q5H9J9 407 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 HP1BP3Q5SSJ5 553 aaPredicted RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 OLFML2BQ68BL8 750 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 RNF19BQ6ZMZ0 732 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 TMC3Q7Z5M5 1100 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 PIGOQ8TEQ8 1089 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 INPP5DQ92835 1189 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MAGOHBQ96A72 148 aaKnown RBP3.14□□□□□ -1.91
CHD9-218ENST00000566029 ZNF653Q96CK0 615 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 MTMR8Q96EF0 704 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 CSRNP2Q9H175 543 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 VCXQ9H320 206 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 STRN4Q9NRL3 753 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 KANSL3Q9P2N6 904 aa3.14□□□□□ -1.91
CHD9-218ENST00000566029 A0A087X0B3 334 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8TH3BQL2 631 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 FOXP2O15409 715 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KRT16P08779 473 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8HP0CJ92 632 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CPA3P15088 417 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TNIP1Q15025 636 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ODR4Q5SWX8 454 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 LONP2Q86WA8 852 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SCYL3Q8IZE3 742 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SAMD3Q8N6K7 520 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 FITM2Q8N6M3 262 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 NGLY1Q96IV0 654 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 RAB17Q9H0T7 212 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SAMD15Q9P1V8 674 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 RABL2BQ9UNT1 228 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 LRCH1Q9Y2L9 728 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DAAM1Q9Y4D1 1078 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 MAP3K19Q56UN5 1328 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DISP2A7MBM2 1401 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 WDR46O15213 610 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 RANBP6O60518 1105 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 BMP15O95972 392 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SERPINB8P50452 374 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 MKRN3Q13064 507 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 CNGA2Q16280 664 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ADGRG6Q86SQ4 1221 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ADCK1Q86TW2 530 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ECHDC2Q86YB7 292 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DIS3LQ8TF46 1054 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 ARMC5Q96C12 935 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 COG3Q96JB2 828 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 C7orf25Q9BPX7 421 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 BRINP2Q9C0B6 783 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 EPB41L5Q9HCM4 733 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GPR108Q9NPR9 543 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 HESX1Q9UBX0 185 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SFMBT1Q9UHJ3 866 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 PCDHA13Q9Y5I0 950 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 BRDTQ58F21 947 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 AKNAD1Q5T1N1 836 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms