RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	EPS15	P42566	896 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	KIF23	Q02241	960 aa	Predicted RBP	5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	MLANA	Q16655	118 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	IQCE	Q6IPM2	695 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	JAZF1	Q86VZ6	243 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	C2CD5	Q86YS7	1000 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	IRF2BP1	Q8IU81	584 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	TEX2	Q8IWB9	1127 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	PLEKHO2	Q8TD55	490 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	RNPC3	Q96LT9	517 aa	Known RBP	5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	DIRC2	Q96SL1	478 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	DHRS4	Q9BTZ2	278 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	PHF20	Q9BVI0	1012 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	NSUN3	Q9H649	340 aa	Known RBP	5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	MARCH2	Q9P0N8	246 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	PGAP2	Q9UHJ9	254 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	SBNO2	Q9Y2G9	1366 aa		5.76	□□□□□ -1.49
BBS4-208	ENST00000565160	SCN7A	Q01118	1682 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	CGNL1	Q0VF96	1302 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	NCAPD2	Q15021	1401 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	TAF1	P21675	1872 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	FUCA1	P04066	466 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	DBH	P09172	617 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	FPR2	P25090	351 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	BCL6	P41182	706 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	SUMO1	P63165	101 aa	Known RBP	5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	BICRAL	Q6AI39	1079 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	LZTR1	Q8N653	840 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	ZSWIM2	Q8NEG5	633 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	DCAF4	Q8WV16	495 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	GPR27	Q9NS67	375 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	KLHL14	Q9P2G3	628 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	TRAF6	Q9Y4K3	522 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	RNF114	Q9Y508	228 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	PCDHA2	Q9Y5H9	948 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	CFAP47	Q6ZTR5	3102 aa		5.75	□□□□□ -1.49
BBS4-208	ENST00000565160	PCDH11X	Q9BZA7	1347 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	PCDH11Y	Q9BZA8	1340 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	ZSWIM8	A7E2V4	1837 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	CACNA1B	Q00975	2339 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	OR14I1	A6ND48	311 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	NUDT19	A8MXV4	375 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	GLI4	P10075	376 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	ARL4A	P40617	200 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	RPL11	P62913	178 aa	Known RBP	5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	NFIX	Q14938	502 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	STYK1	Q6J9G0	422 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	DLK2	Q6UY11	383 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160		Q7L0L9	218 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	ZNF605	Q86T29	641 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	GPC2	Q8N158	579 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	FAM122A	Q96E09	287 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	ZNF552	Q9H707	407 aa	Predicted RBP	5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	RXFP1	Q9HBX9	757 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	MTMR10	Q9NXD2	777 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	FAM53C	Q9NYF3	392 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	HCFC2	Q9Y5Z7	792 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	TRIO	O75962	3097 aa		5.74	□□□□□ -1.49
BBS4-208	ENST00000565160	MYOCOS	A0A1B0GUC4	107 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	ESYT3	A0FGR9	886 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	SRGAP3	O43295	1099 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	CAP1	Q01518	475 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	MESP2	Q0VG99	397 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	RAB3GAP1	Q15042	981 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	ERICH6B	Q5W0A0	696 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	RPTN	Q6XPR3	784 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	CEP68	Q76N32	757 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	NME9	Q86XW9	330 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160		Q8N1Y9	231 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	LTV1	Q96GA3	475 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	CDIP1	Q9H305	208 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	EPB41L4B	Q9H329	900 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	R3HDML	Q9H3Y0	253 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	MRPL42	Q9Y6G3	142 aa	Known RBP	5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	WDR87	Q6ZQQ6	2873 aa		5.73	□□□□□ -1.49
BBS4-208	ENST00000565160	ZFHX4	Q86UP3	3567 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	SSC5D	A1L4H1	1573 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	ZDBF2	Q9HCK1	2354 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	MRC1	P22897	1456 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160		A0A1W2PQJ5	194 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	ZC3H12D	A2A288	527 aa	Known RBP	5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	C22orf46	C9J442	243 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160		H0YIN7	160 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	PAX4	O43316	350 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	MYO1B	O43795	1136 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	NTRK1	P04629	796 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	MPO	P05164	745 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	HSPA5	P11021	654 aa	Known RBP	5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	HOXC9	P31274	260 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	VIPR1	P32241	457 aa		5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	YBX1	P67809	324 aa	Known RBP	5.72	□□□□□ -1.49
BBS4-208	ENST00000565160	LSAMP	Q13449	338 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms