RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MCPH1Q8NEM0 835 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 SCFD1Q8WVM8 642 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 ADCY6O43306 1168 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 SERPINC1P01008 464 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 ZNF865P0CJ78 1059 aaPredicted RBP24.26■■□□□ 1.47
LINC01960-201ENST00000563759 ANKRD40Q6AI12 368 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 CENPPQ6IPU0 288 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 NELFCDQ8IXH7 590 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 PDLIM2Q96JY6 352 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 TSG101Q99816 390 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 NIFKQ9BYG3 293 aaKnown RBP24.26■■□□□ 1.47
LINC01960-201ENST00000563759 SEMA6BQ9H3T3 888 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 GPRC5CQ9NQ84 441 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 MYBP10242 640 aa24.25■■□□□ 1.47
LINC01960-201ENST00000563759 ZNF75DP51815 510 aa24.25■■□□□ 1.47
LINC01960-201ENST00000563759 FANCCQ00597 558 aa24.25■■□□□ 1.47
LINC01960-201ENST00000563759 STXBP4Q6ZWJ1 553 aa24.25■■□□□ 1.47
LINC01960-201ENST00000563759 CSGALNACT2Q8N6G5 542 aa24.25■■□□□ 1.47
LINC01960-201ENST00000563759 BBXQ8WY36 941 aaPredicted RBP24.25■■□□□ 1.47
LINC01960-201ENST00000563759 LGALS2P05162 132 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 PLS3P13797 630 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 NMT1P30419 496 aaKnown RBP24.24■■□□□ 1.47
LINC01960-201ENST00000563759 LRRC63Q05C16 580 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 EMC2Q15006 297 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 CDKAL1Q5VV42 579 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 ATP8B4Q8TF62 1192 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 SLC7A3Q8WY07 619 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 PPP1R9BQ96SB3 815 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 ERAP1Q9NZ08 941 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 K7ENM7 598 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 EPM2AIP1Q7L775 607 aaPredicted RBP24.24■■□□□ 1.47
LINC01960-201ENST00000563759 KIFAP3Q92845 792 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 IFNKQ9P0W0 207 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 TRPC6Q9Y210 931 aa24.24■■□□□ 1.47
LINC01960-201ENST00000563759 EVPLQ92817 2033 aa24.23■■□□□ 1.47
LINC01960-201ENST00000563759 EIF3DO15371 548 aaKnown RBP eCLIP24.23■■□□□ 1.47
LINC01960-201ENST00000563759 MFSD14CQ5VZR4 134 aa24.23■■□□□ 1.47
LINC01960-201ENST00000563759 TLK2Q86UE8 772 aa24.23■■□□□ 1.47
LINC01960-201ENST00000563759 TRIB2Q92519 343 aa24.23■■□□□ 1.47
LINC01960-201ENST00000563759 PRPF6O94906 941 aaKnown RBP24.22■■□□□ 1.47
LINC01960-201ENST00000563759 IGHA2P01877 340 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 MMP3P08254 477 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 ZNF286BP0CG31 522 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 RFC5P40937 340 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 PLCB4Q15147 1175 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 CD99L2Q8TCZ2 262 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 NOC3LQ8WTT2 800 aaKnown RBP24.22■■□□□ 1.47
LINC01960-201ENST00000563759 FIZ1Q96SL8 496 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 DUSP9Q99956 384 aaKnown RBP24.22■■□□□ 1.47
LINC01960-201ENST00000563759 SRRTQ9BXP5 876 aaKnown RBP24.22■■□□□ 1.47
LINC01960-201ENST00000563759 FAM184BQ9ULE4 1060 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 UBE4BO95155 1302 aa24.22■■□□□ 1.47
LINC01960-201ENST00000563759 PPFIA4O75335 1185 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 PEX3P56589 373 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 SPAG1Q07617 926 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 DMP1Q13316 513 aaPredicted RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 BMT2Q1RMZ1 405 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 LENG1Q96BZ8 264 aaPredicted RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 THAP9Q9H5L6 903 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 XPNPEP1Q9NQW7 623 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 ZNF215Q9UL58 517 aaPredicted RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 GNEQ9Y223 722 aaKnown RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 PPME1Q9Y570 386 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 DYNC1LI2O43237 492 aaPredicted RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 SOX10P56693 466 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 UBASH3AP57075 661 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 CAP1Q01518 475 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 TARBP2Q15633 366 aaKnown RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 DGKDQ16760 1214 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 KNOP1Q1ED39 458 aaKnown RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 ZC2HC1CQ53FD0 456 aaPredicted RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 ZNF720Q7Z2F6 126 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 CREBRFQ8IUR6 639 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 ANKRD20A12PQ8NF67 263 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 MRFAP1L1Q96HT8 127 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 XPO4Q9C0E2 1151 aaKnown RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 DHX33Q9H6R0 707 aaKnown RBP24.21■■□□□ 1.47
LINC01960-201ENST00000563759 PDLIM7Q9NR12 457 aa24.21■■□□□ 1.47
LINC01960-201ENST00000563759 CENPFP49454 3210 aa24.2■■□□□ 1.47
LINC01960-201ENST00000563759 KCNJ18B7U540 433 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 GPR25O00155 361 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 CBFA2T2O43439 604 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 MAPTP10636 758 aaKnown RBP24.2■■□□□ 1.46
LINC01960-201ENST00000563759 TBC1D8BQ0IIM8 1120 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 KCNJ12Q14500 433 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 FOXR2Q6PJQ5 311 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 ZNF507Q8TCN5 953 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 EEF2KMTQ96G04 330 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 POLR3FQ9H1D9 316 aaPredicted RBP24.2■■□□□ 1.46
LINC01960-201ENST00000563759 KCTD10Q9H3F6 313 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 C17orf75Q9HAS0 396 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 MAGEC2Q9UBF1 373 aaPredicted RBP24.2■■□□□ 1.46
LINC01960-201ENST00000563759 NRBP1Q9UHY1 535 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 PCDHB13Q9Y5F0 798 aa24.2■■□□□ 1.46
LINC01960-201ENST00000563759 AKR1A1P14550 325 aa24.19■■□□□ 1.46
LINC01960-201ENST00000563759 HOXD10P28358 340 aa24.19■■□□□ 1.46
LINC01960-201ENST00000563759 SMTNP53814 917 aa24.19■■□□□ 1.46
LINC01960-201ENST00000563759 ALCAMQ13740 583 aa24.19■■□□□ 1.46
LINC01960-201ENST00000563759 ZCWPW2Q504Y3 356 aa24.19■■□□□ 1.46
LINC01960-201ENST00000563759 PPP4R3CPQ6ZMV5 832 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms