RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 APPBP2Q92624 585 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 ERCC4Q92889 916 aaPredicted RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 NINJ1Q92982 152 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 DVL3Q92997 716 aaPredicted RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 MAML3Q96JK9 1138 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 LRRC37BQ96QE4 947 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 ELF4Q99607 663 aaPredicted RBP3.48□□□□□ -1.85
CHD9-204ENST00000561869 CABP5Q9NP86 173 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 JADE2Q9NQC1 790 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 ACSS2Q9NR19 701 aa3.48□□□□□ -1.85
CHD9-204ENST00000561869 ARHGAP6O43182 974 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 F2P00734 622 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 CYP17A1P05093 508 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 SLC9A1P19634 815 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 FLT3P36888 993 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 MRE11P49959 708 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 STAT5BP51692 787 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 SLC6A3Q01959 620 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 DSG1Q02413 1049 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 PCBP1Q15365 356 aaKnown RBP eCLIP3.47□□□□□ -1.85
CHD9-204ENST00000561869 EPHA7Q15375 998 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 DALRD3Q5D0E6 543 aaKnown RBP3.47□□□□□ -1.85
CHD9-204ENST00000561869 Q6ZSN1 163 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 USP30Q70CQ3 517 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 OTOP2Q7RTS6 562 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 FILIP1Q7Z7B0 1213 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 LRRTM3Q86VH5 581 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 DHX37Q8IY37 1157 aaKnown RBP3.47□□□□□ -1.85
CHD9-204ENST00000561869 NXPE1Q8N323 547 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 CHST13Q8NET6 341 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 CALML6Q8TD86 181 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 DPYSL5Q9BPU6 564 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 KLC2Q9H0B6 622 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 OXSMQ9NWU1 459 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 H2AFY2Q9P0M6 372 aaPredicted RBP3.47□□□□□ -1.85
CHD9-204ENST00000561869 OAZ3Q9UMX2 235 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 ZFR2Q9UPR6 939 aaKnown RBP3.47□□□□□ -1.85
CHD9-204ENST00000561869 TSC22D4Q9Y3Q8 395 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 TBX22Q9Y458 520 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 SPO11Q9Y5K1 396 aa3.47□□□□□ -1.85
CHD9-204ENST00000561869 ZNF891A8MT65 544 aaPredicted RBP3.46□□□□□ -1.86
CHD9-204ENST00000561869 H7C1D1 291 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 KPNA6O60684 536 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 CDC45O75419 566 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 CR2P20023 1033 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 RAC3P60763 192 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 MYBPC3Q14896 1274 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 SEPT7Q16181 437 aaKnown RBP3.46□□□□□ -1.86
CHD9-204ENST00000561869 ZNF585AQ6P3V2 769 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 KANSL1Q7Z3B3 1105 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 NIM1KQ8IY84 436 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 GPR135Q8IZ08 494 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 FUKQ8N0W3 1084 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 SLC16A11Q8NCK7 471 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 FEZ1Q99689 392 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 TARS2Q9BW92 718 aaKnown RBP3.46□□□□□ -1.86
CHD9-204ENST00000561869 SCAND2PQ9GZW5 306 aaPredicted RBP3.46□□□□□ -1.86
CHD9-204ENST00000561869 OR10A2Q9H208 303 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 PCIF1Q9H4Z3 704 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 ZMAT4Q9H898 229 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 AGO3Q9H9G7 860 aaKnown RBP3.46□□□□□ -1.86
CHD9-204ENST00000561869 MAGEL2Q9UJ55 1249 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 NR2E1Q9Y466 385 aa3.46□□□□□ -1.86
CHD9-204ENST00000561869 CTDP1Q9Y5B0 961 aaPredicted RBP3.46□□□□□ -1.86
CHD9-204ENST00000561869 A0A087X0B3 334 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 UBA6A0AVT1 1052 aaPredicted RBP3.45□□□□□ -1.86
CHD9-204ENST00000561869 PMS2P1A4D2B8 440 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 ENPP3O14638 875 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 TGM5O43548 720 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 RAD17O75943 681 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 RANGAP1P46060 587 aaPredicted RBP3.45□□□□□ -1.86
CHD9-204ENST00000561869 NEK4P51957 841 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 ADAM8P78325 824 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 SMAD3P84022 425 aaKnown RBP3.45□□□□□ -1.86
CHD9-204ENST00000561869 ROM1Q03395 351 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 ZNF174Q15697 407 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 TTC38Q5R3I4 469 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 SLFN12LQ6IEE8 588 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 CNNM4Q6P4Q7 775 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 NOP9Q86U38 636 aaKnown RBP3.45□□□□□ -1.86
CHD9-204ENST00000561869 NME9Q86XW9 330 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 RTKN2Q8IZC4 609 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 Q8N1X5 172 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 GIMAP8Q8ND71 665 aaPredicted RBP3.45□□□□□ -1.86
CHD9-204ENST00000561869 SMC1BQ8NDV3 1235 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 WDR48Q8TAF3 677 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 CHTF18Q8WVB6 975 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 NKD2Q969F2 451 aaPredicted RBP3.45□□□□□ -1.86
CHD9-204ENST00000561869 E2F7Q96AV8 911 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 PLA2G12BQ9BX93 195 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 HAPLN2Q9GZV7 340 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 PLAAQ9Y263 795 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 VWA7Q9Y334 891 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 TESMINQ9Y4I5 508 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 SLC30A1Q9Y6M5 507 aa3.45□□□□□ -1.86
CHD9-204ENST00000561869 C2orf78A6NCI8 922 aa3.44□□□□□ -1.86
CHD9-204ENST00000561869 GSG1L2A8MUP6 293 aa3.44□□□□□ -1.86
CHD9-204ENST00000561869 PLSCR1O15162 318 aa3.44□□□□□ -1.86
CHD9-204ENST00000561869 CDC14BO60729 498 aa3.44□□□□□ -1.86
CHD9-204ENST00000561869 FSHBP01225 129 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms