RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 DNAH12Q6ZR08 3092 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 A0A1W2PPC1 479 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 TRIM43BA6NCK2 446 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 IQCF3P0C7M6 154 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 ACTN1P12814 892 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 BMP8BP34820 402 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 MRPS6P82932 125 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 POU5F1BQ06416 359 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 ZNF410Q86VK4 478 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 PSPC1Q8WXF1 523 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 APBB2Q92870 758 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 TRIM43Q96BQ3 446 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 CCDC34Q96HJ3 373 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 CTAGE1Q96RT6 745 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 MTRQ99707 1265 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 CSRNP2Q9H175 543 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 C17orf75Q9HAS0 396 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 MAGEF1Q9HAY2 307 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 ATP6V0A4Q9HBG4 840 aa13.42□□□□□ -0.26
RABGGTA-215ENST00000560207 GOLGA6L4A6NEF3 574 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 ABCD1P33897 745 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 CRYBB1P53674 252 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 TFDP1Q14186 410 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 PPP2R5AQ15172 486 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 TRIM71Q2Q1W2 868 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 RRAGBQ5VZM2 374 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 PSRC1Q6PGN9 363 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 POTEGQ6S5H5 508 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 KIAA0319LQ8IZA0 1049 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 LINC01465Q8N7H1 131 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 LEO1Q8WVC0 666 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 DNAJB3Q8WWF6 145 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 KIFAP3Q92845 792 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 MMTAG2Q9BU76 263 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 SUGCTQ9HAC7 445 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 BMP2KQ9NSY1 1161 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 WRAP73Q9P2S5 460 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 USP25Q9UHP3 1055 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 TRPV2Q9Y5S1 764 aa13.41□□□□□ -0.26
RABGGTA-215ENST00000560207 A0A1W2PQ27 194 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 A0A1W2PQ64 194 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 A0A1W2PQD8 194 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 CYP11B2P19099 503 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 ZNF200P98182 395 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 AMPD3Q01432 767 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 HIC1Q14526 733 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 EMC2Q15006 297 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 TMEM119Q4V9L6 283 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 PADI6Q6TGC4 694 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 SYT2Q8N9I0 419 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 PIGOQ8TEQ8 1089 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 TRAPPC12Q8WVT3 735 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 DHX38Q92620 1227 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 CELF4Q9BZC1 486 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 BHMT2Q9H2M3 363 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 IL23AQ9NPF7 189 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 ZMYND8Q9ULU4 1186 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 AKT3Q9Y243 479 aa13.4□□□□□ -0.26
RABGGTA-215ENST00000560207 SCN5AQ14524 2016 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 PP2D1A8MPX8 630 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 H0YGN5 161 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 BAIAP3O94812 1187 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 CXCL10P02778 98 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 CMA1P23946 247 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 GUCY2CP25092 1073 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 CYP2C18P33260 490 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 NPEPPSP55786 919 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 GRB10Q13322 594 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 ZRSR1Q15695 479 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 FOXD4L6Q3SYB3 417 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 PLA2G4FQ68DD2 849 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 FOXD4L3Q6VB84 417 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 LARP4BQ92615 738 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 BADQ92934 168 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 GDF15Q99988 308 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 NFKBIZQ9BYH8 718 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 GCOM2Q9BZD3 368 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 FAM49AQ9H0Q0 323 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 SUCLA2Q9P2R7 463 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 ODF2LQ9ULJ1 636 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 SIP14410 1827 aa13.39□□□□□ -0.27
RABGGTA-215ENST00000560207 H0YCG3 227 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 GPR182O15218 404 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 PLA2G4BP0C869 781 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 CDC25AP30304 524 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 STAT6P42226 847 aa13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 NCBP1Q09161 790 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-215ENST00000560207 AXDND1Q5T1B0 1012 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms