RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 NME8Q8N427 588 aa21.8■■□□□ 1.08
SHF-205ENST00000559566 ZSCAN16Q9H4T2 348 aaPredicted RBP21.8■■□□□ 1.08
SHF-205ENST00000559566 DHX33Q9H6R0 707 aaKnown RBP21.8■■□□□ 1.08
SHF-205ENST00000559566 KAT6AQ92794 2004 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 CCT6AP40227 531 aaKnown RBP21.79■■□□□ 1.08
SHF-205ENST00000559566 RARRES1P49788 294 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 CEBPZQ03701 1054 aaKnown RBP21.79■■□□□ 1.08
SHF-205ENST00000559566 IER5Q5VY09 327 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 SNX29Q8TEQ0 813 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 ADAMTS10Q9H324 1103 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 XPNPEP1Q9NQW7 623 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 GINS2Q9Y248 185 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 ZDHHC9Q9Y397 364 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 KDM3AQ9Y4C1 1321 aa21.79■■□□□ 1.08
SHF-205ENST00000559566 ZBBXA8MT70 800 aa21.78■■□□□ 1.08
SHF-205ENST00000559566 F13A1P00488 732 aa21.78■■□□□ 1.08
SHF-205ENST00000559566 DEFB103AP81534 67 aa21.78■■□□□ 1.08
SHF-205ENST00000559566 ARL6IP4Q66PJ3 421 aaKnown RBP21.78■■□□□ 1.08
SHF-205ENST00000559566 TMCO2Q7Z6W1 182 aaPredicted RBP21.78■■□□□ 1.08
SHF-205ENST00000559566 ERMNQ8TAM6 284 aa21.78■■□□□ 1.08
SHF-205ENST00000559566 OSMRQ99650 979 aa21.78■■□□□ 1.08
SHF-205ENST00000559566 ANKEF1Q9NU02 776 aa21.78■■□□□ 1.08
SHF-205ENST00000559566 AKT3Q9Y243 479 aa21.78■■□□□ 1.08
SHF-205ENST00000559566 RPLP2P05387 115 aaKnown RBP21.77■■□□□ 1.08
SHF-205ENST00000559566 MARCKSP29966 332 aaPredicted RBP21.77■■□□□ 1.08
SHF-205ENST00000559566 CD52P31358 61 aa21.77■■□□□ 1.08
SHF-205ENST00000559566 NLRP11P59045 1033 aaKnown RBP21.77■■□□□ 1.08
SHF-205ENST00000559566 WDR5P61964 334 aaKnown RBP21.77■■□□□ 1.08
SHF-205ENST00000559566 EMC2Q15006 297 aa21.77■■□□□ 1.08
SHF-205ENST00000559566 FOXD4L6Q3SYB3 417 aaPredicted RBP21.77■■□□□ 1.08
SHF-205ENST00000559566 FOXD4L3Q6VB84 417 aaPredicted RBP21.77■■□□□ 1.08
SHF-205ENST00000559566 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.77■■□□□ 1.08
SHF-205ENST00000559566 OTUD6AQ7L8S5 288 aa21.77■■□□□ 1.08
SHF-205ENST00000559566 KCNK18Q7Z418 384 aa21.77■■□□□ 1.08
SHF-205ENST00000559566 KSR1Q8IVT5 923 aa21.77■■□□□ 1.08
SHF-205ENST00000559566 TMEM143Q96AN5 459 aa21.77■■□□□ 1.08
SHF-205ENST00000559566 PNMA5Q96PV4 448 aa21.77■■□□□ 1.08
SHF-205ENST00000559566 IFIH1Q9BYX4 1025 aaKnown RBP21.77■■□□□ 1.08
SHF-205ENST00000559566 NOC2LQ9Y3T9 749 aaKnown RBP21.77■■□□□ 1.08
SHF-205ENST00000559566 ACTN1P12814 892 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 PBX2P40425 430 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 GPC3P51654 580 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 POLGP54098 1239 aaPredicted RBP21.76■■□□□ 1.07
SHF-205ENST00000559566 HAUS3Q68CZ6 603 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 TSHZ1Q6ZSZ6 1077 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 LRRC15Q8TF66 581 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 LINC01599Q8WXQ3 324 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 SEPT8Q92599 483 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 CHAMP1Q96JM3 812 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 MAP7D2Q96T17 732 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 SUCLA2Q9P2R7 463 aaPredicted RBP21.76■■□□□ 1.07
SHF-205ENST00000559566 TFIP11Q9UBB9 837 aaKnown RBP21.76■■□□□ 1.07
SHF-205ENST00000559566 FBXO2Q9UK22 296 aaPredicted RBP21.76■■□□□ 1.07
SHF-205ENST00000559566 KIAA1024Q9UPX6 916 aa21.76■■□□□ 1.07
SHF-205ENST00000559566 LAMA2P24043 3122 aaKnown RBP21.76■■□□□ 1.07
SHF-205ENST00000559566 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.75■■□□□ 1.07
SHF-205ENST00000559566 M0QZ92 97 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 BAIAP3O94812 1187 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 BMP15O95972 392 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 TMOD1P28289 359 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 RFC5P40937 340 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 CRYBB1P53674 252 aaPredicted RBP21.75■■□□□ 1.07
SHF-205ENST00000559566 NACC1Q96RE7 527 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 RAB34Q9BZG1 259 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 TMX1Q9H3N1 280 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 DDX19AQ9NUU7 478 aaKnown RBP21.75■■□□□ 1.07
SHF-205ENST00000559566 DBR1Q9UK59 544 aaKnown RBP21.75■■□□□ 1.07
SHF-205ENST00000559566 PADI3Q9ULW8 664 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 PPME1Q9Y570 386 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 SLC4A7Q9Y6M7 1214 aa21.75■■□□□ 1.07
SHF-205ENST00000559566 ARID2Q68CP9 1835 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 ABHD14A-ACY1A0A1B0GW23 586 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 E9PMD0 336 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 USO1O60763 962 aaKnown RBP21.74■■□□□ 1.07
SHF-205ENST00000559566 CSDE1O75534 798 aaKnown RBP21.74■■□□□ 1.07
SHF-205ENST00000559566 BRD1O95696 1058 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 XRCC6P12956 609 aaKnown RBP eCLIP21.74■■□□□ 1.07
SHF-205ENST00000559566 NASPP49321 788 aaPredicted RBP21.74■■□□□ 1.07
SHF-205ENST00000559566 RABGGTBP53611 331 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 GRB10Q13322 594 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 IKBKEQ14164 716 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 BECN1Q14457 450 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 SPECC1Q5M775 1068 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 KRT79Q5XKE5 535 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 USP49Q70CQ1 688 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 FAM228AQ86W67 206 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 SLC7A3Q8WY07 619 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 CLIC6Q96NY7 704 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 PLIN2Q99541 437 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 ERVK-5Q9HDB9 667 aa21.74■■□□□ 1.07
SHF-205ENST00000559566 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.73■■□□□ 1.07
SHF-205ENST00000559566 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.73■■□□□ 1.07
SHF-205ENST00000559566 MUTP22033 750 aa21.73■■□□□ 1.07
SHF-205ENST00000559566 FGFR4P22455 802 aa21.73■■□□□ 1.07
SHF-205ENST00000559566 HYIQ5T013 277 aa21.73■■□□□ 1.07
SHF-205ENST00000559566 RTN4RL1Q86UN2 441 aaPredicted RBP21.73■■□□□ 1.07
SHF-205ENST00000559566 RHPN2Q8IUC4 686 aa21.73■■□□□ 1.07
SHF-205ENST00000559566 PRPF31Q8WWY3 499 aaKnown RBP21.73■■□□□ 1.07
SHF-205ENST00000559566 MTRQ99707 1265 aa21.73■■□□□ 1.07
SHF-205ENST00000559566 CSRNP2Q9H175 543 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms