RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 LRIG3Q6UXM1 1119 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 NT5DC3Q86UY8 548 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 MICALL1Q8N3F8 863 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 INTUQ9ULD6 942 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 NFS1Q9Y697 457 aa18.08■□□□□ 0.48
SPG11-215ENST00000559193 KRIT1O00522 736 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 TOM1O60784 492 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 GDF11O95390 407 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 FERP16591 822 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 EPN3Q9H201 632 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 PI4KBQ9UBF8 816 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 EVI5O60447 810 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 PPP1R37O75864 691 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 NMT1P30419 496 aaKnown RBP18.07■□□□□ 0.48
SPG11-215ENST00000559193 IKQ13123 557 aaPredicted RBP18.07■□□□□ 0.48
SPG11-215ENST00000559193 SLC30A10Q6XR72 485 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 DAAM2Q86T65 1068 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 GMCL1P1Q8NEA9 526 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 OR2W6PQ8NHA6 318 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 SLC30A5Q8TAD4 765 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 PIGOQ8TEQ8 1089 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 LMBR1Q8WVP7 490 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 GMCL1Q96IK5 515 aa18.07■□□□□ 0.48
SPG11-215ENST00000559193 CCDC188H7C350 402 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 GAP43P17677 238 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 STAT1P42224 750 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 GALCP54803 685 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 NPEPPSP55786 919 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 CTTNQ14247 550 aaKnown RBP18.06■□□□□ 0.48
SPG11-215ENST00000559193 PTGISQ16647 500 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 TMEM179Q6ZVK1 233 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 FAM186BQ8IYM0 893 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 HES6Q96HZ4 224 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 AMACRQ9UHK6 382 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 IGLV3-22A0A075B6J6 115 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 F8VZ95 297 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 EIF3DO15371 548 aaKnown RBP eCLIP18.06■□□□□ 0.48
SPG11-215ENST00000559193 CYP3A4P08684 503 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 MDH1P40925 334 aaKnown RBP18.06■□□□□ 0.48
SPG11-215ENST00000559193 ZC2HC1CQ53FD0 456 aaPredicted RBP18.06■□□□□ 0.48
SPG11-215ENST00000559193 KIAA0825Q8IV33 1275 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 SYCE1Q8N0S2 351 aa18.06■□□□□ 0.48
SPG11-215ENST00000559193 NCANO14594 1321 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 ATXN2Q99700 1313 aaKnown RBP18.05■□□□□ 0.48
SPG11-215ENST00000559193 ERLIN2O94905 339 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 FLT3P36888 993 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 COG2Q14746 738 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 NAA35Q5VZE5 725 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 B4GALNT4Q76KP1 1039 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 KAT2BQ92831 832 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 LRRC45Q96CN5 670 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 HSD17B14Q9BPX1 270 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 IDI2Q9BXS1 227 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 DBNDD1Q9H9R9 158 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 OSGEPQ9NPF4 335 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 G3V3G9 751 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 FAM13AO94988 1023 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 SOX5P35711 763 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 PSMC2P35998 433 aaKnown RBP18.05■□□□□ 0.48
SPG11-215ENST00000559193 ZNF76P36508 570 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 JAG1P78504 1218 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 ZNF844Q08AG5 666 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 SLC15A2Q16348 729 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 DCAF8Q5TAQ9 597 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 GLYCTKQ8IVS8 523 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 SLITRK6Q9H5Y7 841 aa18.05■□□□□ 0.48
SPG11-215ENST00000559193 IGSF9BQ9UPX0 1349 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 DAPK3O43293 454 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 NFIL3Q16649 462 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 C1orf186Q6ZWK4 172 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 KSR1Q8IVT5 923 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 MYCT1Q8N699 235 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 ZNF473Q8WTR7 871 aaKnown RBP18.04■□□□□ 0.48
SPG11-215ENST00000559193 SYT11Q9BT88 431 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 WDR18Q9BV38 432 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 GOLGA6L10A6NI86 522 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 GCOM1H8Y6P7 765 aaPredicted RBP18.04■□□□□ 0.48
SPG11-215ENST00000559193 ZBTB39O15060 712 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 TTI1O43156 1089 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 BUB1BO60566 1050 aaPredicted RBP18.04■□□□□ 0.48
SPG11-215ENST00000559193 MYZAPP0CAP1 466 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 HPDP32754 393 aaPredicted RBP18.04■□□□□ 0.48
SPG11-215ENST00000559193 CTNNA1P35221 906 aaKnown RBP18.04■□□□□ 0.48
SPG11-215ENST00000559193 FMO5P49326 533 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 SEC24CP53992 1094 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 DYDC2Q96IM9 177 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 GJD4Q96KN9 370 aaPredicted RBP18.04■□□□□ 0.48
SPG11-215ENST00000559193 FIZ1Q96SL8 496 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 PAGR1Q9BTK6 254 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 GPR88Q9GZN0 384 aa18.04■□□□□ 0.48
SPG11-215ENST00000559193 SLITRK3O94933 977 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 BMP3P12645 472 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 INPP5BP32019 993 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 DRAP1Q14919 205 aaPredicted RBP18.03■□□□□ 0.48
SPG11-215ENST00000559193 SEC14L1Q92503 715 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 STK33Q9BYT3 514 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 CELF4Q9BZC1 486 aaKnown RBP18.03■□□□□ 0.48
SPG11-215ENST00000559193 CENPHQ9H3R5 247 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 DNAJC12Q9UKB3 198 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms