RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PCDH8O95206 1070 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 C4BPAP04003 597 aaKnown RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 MSL3P1P0C860 447 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 FOSL1P15407 271 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 RHCEP18577 417 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PAX3P23760 479 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PPM1FP49593 454 aaPredicted RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 MANFP55145 182 aaKnown RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 LGALS4P56470 323 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 BCAR1P56945 870 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 MRPS9P82933 396 aaKnown RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 SLC6A3Q01959 620 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 RHDQ02161 417 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 MVKQ03426 396 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ADCY2Q08462 1091 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 MORC3Q14149 939 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 DHX8Q14562 1220 aaKnown RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 KIAA0753Q2KHM9 967 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PAN2Q504Q3 1202 aaKnown RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PITRM1Q5JRX3 1037 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PRAMEF18Q5VWM3 479 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ANO1Q5XXA6 986 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 SLFN12LQ6IEE8 588 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 C11orf96Q7Z7L8 435 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 SRLQ86TD4 932 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 SPICE1Q8N0Z3 855 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 THEMISQ8N1K5 641 aaPredicted RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ENAHQ8N8S7 591 aaPredicted RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ANKS4BQ8N8V4 417 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PHOSPHO1Q8TCT1 267 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 FBXO41Q8TF61 875 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 LINC01599Q8WXQ3 324 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 AUTS2Q8WXX7 1259 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 SEC14L1Q92503 715 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 DDX11Q96FC9 970 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 MISP3Q96FF7 219 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ASIC4Q96FT7 647 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 C16orf92Q96LL3 132 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 FAM193BQ96PV7 902 aaPredicted RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ALPK1Q96QP1 1244 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 STRBPQ96SI9 672 aaKnown RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ACO2Q99798 780 aaKnown RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ACE2Q9BYF1 805 aaPredicted RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 GTPBP4Q9BZE4 634 aaKnown RBP2.87□□□□□ -1.95
GABPB1-209ENST00000559100 SLC12A5Q9H2X9 1139 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 ASH2LQ9UBL3 628 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 DPP7Q9UHL4 492 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 GPR160Q9UJ42 338 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 VAV3Q9UKW4 847 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PALD1Q9ULE6 856 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PHTF1Q9UMS5 762 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 USP18Q9UMW8 372 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 DMTF1Q9Y222 760 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 SIT1Q9Y3P8 196 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PCDHGB6Q9Y5F9 930 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 PPP2R3BQ9Y5P8 575 aa2.87□□□□□ -1.95
GABPB1-209ENST00000559100 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.86□□□□□ -1.95
GABPB1-209ENST00000559100 PRSS38A1L453 326 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 FITM1A5D6W6 292 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 HMGB1P1B2RPK0 211 aaPredicted RBP2.86□□□□□ -1.95
GABPB1-209ENST00000559100 F8W031 263 aaPredicted RBP2.86□□□□□ -1.95
GABPB1-209ENST00000559100 TPP1O14773 563 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 NRDCO43847 1150 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 PRPF6O94906 941 aaKnown RBP2.86□□□□□ -1.95
GABPB1-209ENST00000559100 POU2F2P09086 479 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 ZGLP1P0C6A0 271 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 PDCP20941 246 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 XPAP23025 273 aaPredicted RBP2.86□□□□□ -1.95
GABPB1-209ENST00000559100 SDHAP31040 664 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 SLC6A11P48066 632 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 TRAPPC10P48553 1259 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 MTNR1BP49286 362 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 EPHA5P54756 1037 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 ROM1Q03395 351 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 PPARAQ07869 468 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 BNIP3Q12983 259 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 CHAF1AQ13111 956 aaPredicted RBP2.86□□□□□ -1.95
GABPB1-209ENST00000559100 STK3Q13188 491 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 SPIDRQ14159 915 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 KIR3DS1Q14943 382 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 PGS1Q32NB8 556 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 C4orf46Q504U0 113 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 EMC4Q5J8M3 183 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 KIAA1841Q6NSI8 718 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 DARS2Q6PI48 645 aaKnown RBP2.86□□□□□ -1.95
GABPB1-209ENST00000559100 USP45Q70EL2 814 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 MIGA2Q7L4E1 593 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 SRGAP1Q7Z6B7 1085 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 SKAP1Q86WV1 359 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 CILP2Q8IUL8 1156 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 DENND1CQ8IV53 801 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 FAM186BQ8IYM0 893 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 STK11IPQ8N1F8 1099 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 PAF1Q8N7H5 531 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 FAM156AQ8NDB6 213 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 NLGN2Q8NFZ4 835 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 PPP1R35Q8TAP8 253 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 DIS3LQ8TF46 1054 aaKnown RBP2.86□□□□□ -1.95
GABPB1-209ENST00000559100 CLEC4DQ8WXI8 215 aa2.86□□□□□ -1.95
GABPB1-209ENST00000559100 ASB15Q8WXK1 588 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms