RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 OAS3Q9Y6K5 1087 aaKnown RBP5.24□□□□□ -1.57
SPG11-211ENST00000558561 MYH13Q9UKX3 1938 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 TRPM7Q96QT4 1865 aa5.24□□□□□ -1.57
SPG11-211ENST00000558561 CCDC85CA6NKD9 419 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 H0Y8X5 98 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 SMARCA5O60264 1052 aaPredicted RBP5.23□□□□□ -1.57
SPG11-211ENST00000558561 SURF6O75683 361 aaKnown RBP5.23□□□□□ -1.57
SPG11-211ENST00000558561 PPM1BO75688 479 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 CHGBP05060 677 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 SYPP08247 313 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 DEFB115Q30KQ5 88 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 CEP85Q6P2H3 762 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 CRTC3Q6UUV7 619 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 ZPBP2Q6X784 338 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 PI4K2BQ8TCG2 481 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 SSH3Q8TE77 659 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 EAF2Q96CJ1 260 aaPredicted RBP5.23□□□□□ -1.57
SPG11-211ENST00000558561 ZDHHC15Q96MV8 337 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 NEUROD6Q96NK8 337 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 GBP3Q9H0R5 595 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 ADAMTS10Q9H324 1103 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 ZBTB40Q9NUA8 1239 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 GGA3Q9NZ52 723 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 PRR13Q9NZ81 148 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 WHRNQ9P202 907 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 EXOC6BQ9Y2D4 811 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 FHOD1Q9Y613 1164 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 COL1A1P02452 1464 aaPredicted RBP5.23□□□□□ -1.57
SPG11-211ENST00000558561 PCNTO95613 3336 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 FAM205AQ6ZU69 1335 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 MROH5Q6ZUA9 1318 aa5.23□□□□□ -1.57
SPG11-211ENST00000558561 DNAJC25-GNG10A0A024R161 153 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 A0A1B0GUL7 405 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 SUSD5O60279 629 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 FKTNO75072 461 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 RNASE1P07998 156 aaKnown RBP5.22□□□□□ -1.57
SPG11-211ENST00000558561 GNAI3P08754 354 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 VAV1P15498 845 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 RPS12P25398 132 aaKnown RBP5.22□□□□□ -1.57
SPG11-211ENST00000558561 PRDX5P30044 214 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 PCBP3P57721 371 aaKnown RBP5.22□□□□□ -1.57
SPG11-211ENST00000558561 TEKQ02763 1124 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 MTX1Q13505 466 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 SERINC3Q13530 473 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 ATP2B3Q16720 1220 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 ZNF792Q3KQV3 632 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 RALGPS1Q5JS13 557 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 MFSD14BQ5SR56 506 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 APOBEC3HQ6NTF7 200 aaKnown RBP5.22□□□□□ -1.57
SPG11-211ENST00000558561 SLC23A3Q6PIS1 610 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 KRT26Q7Z3Y9 468 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 NBPF11Q86T75 865 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 SAPCD2Q86UD0 394 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 ARHGEF39Q8N4T4 335 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 JMYQ8N9B5 988 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 AGBL5Q8NDL9 886 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 PPP1R14AQ96A00 147 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 CDCA5Q96FF9 252 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 IL1RAPL2Q9NP60 686 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 SLAMF8Q9P0V8 285 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 TCFL5Q9UL49 500 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 ABT1Q9ULW3 272 aaKnown RBP5.22□□□□□ -1.57
SPG11-211ENST00000558561 DIS3Q9Y2L1 958 aaKnown RBP5.22□□□□□ -1.57
SPG11-211ENST00000558561 SUGT1Q9Y2Z0 365 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 KIF16BQ96L93 1317 aa5.22□□□□□ -1.57
SPG11-211ENST00000558561 WDR33Q9C0J8 1336 aaKnown RBP5.22□□□□□ -1.57
SPG11-211ENST00000558561 AKAP11Q9UKA4 1901 aa5.21□□□□□ -1.57
SPG11-211ENST00000558561 SSU72P8A0A1W2PR75 194 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 TCP10L2B9ZVM9 353 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 FOXN1O15353 648 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 USP2O75604 605 aaPredicted RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 CIAO1O76071 339 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 GSNP06396 782 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 IFIT1P09914 478 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 RPL10P27635 214 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 BMP8BP34820 402 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 IL15P40933 162 aaPredicted RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 RBM5P52756 815 aaKnown RBP eCLIP5.21□□□□□ -1.58
SPG11-211ENST00000558561 IRX6P78412 446 aaPredicted RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 G3BP1Q13283 466 aaKnown RBP eCLIP5.21□□□□□ -1.58
SPG11-211ENST00000558561 RASGRF1Q13972 1273 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 MVPQ14764 893 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 PUM3Q15397 648 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 DLGAP5Q15398 846 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 SV2CQ496J9 727 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 RNF111Q6ZNA4 994 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 EEPD1Q7L9B9 569 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 ZNF804AQ7Z570 1209 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 FTSJ3Q8IY81 847 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 LRRN4CLQ8ND94 238 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 LPIN2Q92539 896 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 UBXN4Q92575 508 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 DCPSQ96C86 337 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 EDC3Q96F86 508 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 RCC1LQ96I51 464 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 CLMNQ96JQ2 1002 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 TEPSINQ96N21 525 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 R3HDMLQ9H3Y0 253 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 HMG20BQ9P0W2 317 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 SIRPGQ9P1W8 387 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms