RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 TUBGCP2Q9BSJ2 902 aa22.52■■□□□ 1.2
SNRPA1-205ENST00000558036 VTA1Q9NP79 307 aa22.52■■□□□ 1.2
SNRPA1-205ENST00000558036 DIS3Q9Y2L1 958 aaKnown RBP22.52■■□□□ 1.2
SNRPA1-205ENST00000558036 PRKCSHP14314 528 aaPredicted RBP22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 GOLGA8FQ08AF8 430 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 GOLGA8DPQ0D2H9 430 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 BMT2Q1RMZ1 405 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 ZSCAN30Q86W11 494 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 GLG1Q92896 1179 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 LARSQ9P2J5 1176 aaKnown RBP22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 ZKSCAN5Q9Y2L8 839 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 K7ENM7 598 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 PLS3P13797 630 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 MTIF2P46199 727 aaKnown RBP22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 PEX3P56589 373 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 FKBP3Q00688 224 aaKnown RBP22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 HHIPL1Q96JK4 782 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 DRC1Q96MC2 740 aa22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 ZHX1Q9UKY1 873 aaPredicted RBP22.51■■□□□ 1.19
SNRPA1-205ENST00000558036 WDR81Q562E7 1941 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 LOXHD1Q8IVV2 1947 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 ZMYM2Q9UBW7 1377 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 ARHGAP1Q07960 439 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 MAP2K5Q13163 448 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 SPECC1LQ69YQ0 1117 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 FAM114A1Q8IWE2 563 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 KIFC3Q9BVG8 833 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 AZI2Q9H6S1 392 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 XPNPEP1Q9NQW7 623 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 FLRT1Q9NZU1 646 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 IMPACTQ9P2X3 320 aa22.5■■□□□ 1.19
SNRPA1-205ENST00000558036 CTGFP29279 349 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 PRAMEF19Q5SWL8 479 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 FAM160B1Q5W0V3 765 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 ARMCX5Q6P1M9 558 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 EIF3DO15371 548 aaKnown RBP eCLIP22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 DGAT1O75907 488 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 NR2F2P24468 414 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 UBXN1Q04323 297 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 CCL14Q16627 93 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 AFAP1L1Q8TED9 768 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 BSNDQ8WZ55 320 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 PDLIM7Q9NR12 457 aa22.49■■□□□ 1.19
SNRPA1-205ENST00000558036 CLIC2O15247 247 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 TGFB1I1O43294 461 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 CYP2B6P20813 491 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 POLGP54098 1239 aaPredicted RBP22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 ADAM9Q13443 819 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 ACVR2BQ13705 512 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 CEP135Q66GS9 1140 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 LRRC8AQ8IWT6 810 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 TIPINQ9BVW5 301 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 TRAF3IP3Q9Y228 551 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 PDXKO00764 312 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 SLC16A4O15374 487 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 CA12O43570 354 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 PBX1P40424 430 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 FOXR2Q6PJQ5 311 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 STRA6Q9BX79 667 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 ATP6V0A4Q9HBG4 840 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 TYW1Q9NV66 732 aaKnown RBP22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 SLC5A4Q9NY91 659 aa22.48■■□□□ 1.19
SNRPA1-205ENST00000558036 RBM47A0AV96 593 aaKnown RBP22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 LGALS16A8MUM7 142 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 TNPO2O14787 897 aaKnown RBP22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 ADCY6O43306 1168 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 PPP1R37O75864 691 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 FGFR1OPO95684 399 aaKnown RBP22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 EMC2Q15006 297 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 EDRF1Q3B7T1 1238 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 MIIPQ5JXC2 388 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 TMEM143Q96AN5 459 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 NOC4LQ9BVI4 516 aaKnown RBP22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 ABHD16BQ9H3Z7 469 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 PYCARDQ9ULZ3 195 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 PCDHB13Q9Y5F0 798 aa22.47■■□□□ 1.19
SNRPA1-205ENST00000558036 CCDC169A6NNP5 214 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 LGR5O75473 907 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 SMPD1P17405 629 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 CYP2C19P33261 490 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 NPTX2P47972 431 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 PPP4R3CPQ6ZMV5 832 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 AFG1LQ8WV93 481 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 NIFKQ9BYG3 293 aaKnown RBP22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 ARHGAP39Q9C0H5 1083 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 DOCK3Q8IZD9 2030 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 GH1P01241 217 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 MSNP26038 577 aaKnown RBP22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 TBX2Q13207 712 aaPredicted RBP22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 STXBP4Q6ZWJ1 553 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 HAUS6Q7Z4H7 955 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 MCPH1Q8NEM0 835 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 USP6NLQ92738 828 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 CAPNS2Q96L46 248 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 CEP89Q96ST8 783 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 NRBP2Q9NSY0 501 aa22.46■■□□□ 1.19
SNRPA1-205ENST00000558036 CALUO43852 315 aaPredicted RBP22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 NR3C1P04150 777 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 GSDMDP57764 484 aa22.45■■□□□ 1.18
SNRPA1-205ENST00000558036 DMP1Q13316 513 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms