RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TMEM39AQ9NV64 488 aa23.67■■□□□ 1.38
CASC4-204ENST00000557945 TRIP12Q14669 1992 aaPredicted RBP23.67■■□□□ 1.38
CASC4-204ENST00000557945 EVI5O60447 810 aa23.66■■□□□ 1.38
CASC4-204ENST00000557945 MAFO75444 373 aaPredicted RBP23.66■■□□□ 1.38
CASC4-204ENST00000557945 DGAT1O75907 488 aa23.66■■□□□ 1.38
CASC4-204ENST00000557945 CLCN3P51790 818 aa23.66■■□□□ 1.38
CASC4-204ENST00000557945 MCM6Q14566 821 aa23.66■■□□□ 1.38
CASC4-204ENST00000557945 EMC2Q15006 297 aa23.66■■□□□ 1.38
CASC4-204ENST00000557945 IQUBQ8NA54 791 aa23.66■■□□□ 1.38
CASC4-204ENST00000557945 DHX33Q9H6R0 707 aaKnown RBP23.66■■□□□ 1.38
CASC4-204ENST00000557945 GADD45BO75293 160 aaPredicted RBP23.65■■□□□ 1.38
CASC4-204ENST00000557945 TMOD1P28289 359 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 NDUFA8P51970 172 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 MAEAQ7L5Y9 396 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 SYT2Q8N9I0 419 aaPredicted RBP23.65■■□□□ 1.38
CASC4-204ENST00000557945 DNAJB3Q8WWF6 145 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 LARP4BQ92615 738 aaKnown RBP23.65■■□□□ 1.38
CASC4-204ENST00000557945 DHX38Q92620 1227 aaKnown RBP23.65■■□□□ 1.38
CASC4-204ENST00000557945 WNT8BQ93098 351 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 MTRQ99707 1265 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 PYM1Q9BRP8 204 aaKnown RBP23.65■■□□□ 1.38
CASC4-204ENST00000557945 GOLPH3LQ9H4A5 285 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 ATP6V0A4Q9HBG4 840 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 SMIM35A0A1B0GVV1 85 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 THPOP40225 353 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 SYKP43405 635 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 DNM2P50570 870 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 SLC12A3P55017 1021 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 NAALADL2Q58DX5 795 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 RSPH3Q86UC2 560 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 CCDC155Q8N6L0 562 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 HPSEQ9Y251 543 aa23.65■■□□□ 1.38
CASC4-204ENST00000557945 IGKV6-21A0A0C4DH24 114 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 CYP11B2P19099 503 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 BFSP2Q13515 415 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 RINT1Q6NUQ1 792 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 SH3RF1Q7Z6J0 888 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 GPBP1Q86WP2 473 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 TMEM143Q96AN5 459 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 MAP7D2Q96T17 732 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 RUSC1Q9BVN2 902 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 PDLIM7Q9NR12 457 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 PRKAG2Q9UGJ0 569 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 TBX21Q9UL17 535 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 AKT3Q9Y243 479 aa23.64■■□□□ 1.37
CASC4-204ENST00000557945 FAM237AA0A1B0GTK4 181 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 GOLGA6L22H0YM25 854 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 GAS2O43903 313 aaKnown RBP23.63■■□□□ 1.37
CASC4-204ENST00000557945 DRP2Q13474 957 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 E2F4Q16254 413 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 FAM102BQ5T8I3 360 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 SV2BQ7L1I2 683 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 KIAA0319LQ8IZA0 1049 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 MCPH1Q8NEM0 835 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 PPP1R12CQ9BZL4 782 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 HIPK3Q9H422 1215 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 CUEDC2Q9H467 287 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 XPNPEP1Q9NQW7 623 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 SUCLA2Q9P2R7 463 aaPredicted RBP23.63■■□□□ 1.37
CASC4-204ENST00000557945 ARID2Q68CP9 1835 aa23.63■■□□□ 1.37
CASC4-204ENST00000557945 ALPK3Q96L96 1907 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 MKI67P46013 3256 aaKnown RBP23.62■■□□□ 1.37
CASC4-204ENST00000557945 DNAH12Q6ZR08 3092 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 CTSHP09668 335 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 UBE2HP62256 183 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 TMEM62Q0P6H9 643 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 MKRN4PQ13434 485 aaPredicted RBP23.62■■□□□ 1.37
CASC4-204ENST00000557945 TRIM71Q2Q1W2 868 aaKnown RBP23.62■■□□□ 1.37
CASC4-204ENST00000557945 C1orf186Q6ZWK4 172 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 CEP57L1Q8IYX8 460 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 LINC01465Q8N7H1 131 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 CAGE1Q8TC20 777 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 TCP11Q8WWU5 503 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 NOC4LQ9BVI4 516 aaKnown RBP23.62■■□□□ 1.37
CASC4-204ENST00000557945 SERTAD1Q9UHV2 236 aa23.62■■□□□ 1.37
CASC4-204ENST00000557945 TRIM43BA6NCK2 446 aa23.61■■□□□ 1.37
CASC4-204ENST00000557945 VTNP04004 478 aa23.61■■□□□ 1.37
CASC4-204ENST00000557945 KRT18P05783 430 aaKnown RBP23.61■■□□□ 1.37
CASC4-204ENST00000557945 CKBP12277 381 aa23.61■■□□□ 1.37
CASC4-204ENST00000557945 RAD51AP2Q09MP3 1159 aa23.61■■□□□ 1.37
CASC4-204ENST00000557945 IER5Q5VY09 327 aa23.61■■□□□ 1.37
CASC4-204ENST00000557945 NME8Q8N427 588 aa23.61■■□□□ 1.37
CASC4-204ENST00000557945 PSPC1Q8WXF1 523 aaKnown RBP23.61■■□□□ 1.37
CASC4-204ENST00000557945 TRIM43Q96BQ3 446 aaPredicted RBP23.61■■□□□ 1.37
CASC4-204ENST00000557945 PPP1R16BQ96T49 567 aa23.61■■□□□ 1.37
CASC4-204ENST00000557945 GPRC5CQ9NQ84 441 aa23.61■■□□□ 1.37
CASC4-204ENST00000557945 EVPLQ92817 2033 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 LOXHD1Q8IVV2 1947 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 NPHP3-ACAD11A0A0J9YXS1 232 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 KIAA0355O15063 1070 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 RPLP2P05387 115 aaKnown RBP23.6■■□□□ 1.37
CASC4-204ENST00000557945 RAG1P15918 1043 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 RGS19P49795 217 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 LONRF3Q496Y0 759 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 RHPN2Q8IUC4 686 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 STAMQ92783 540 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 POLR3FQ9H1D9 316 aaPredicted RBP23.6■■□□□ 1.37
CASC4-204ENST00000557945 POLD4Q9HCU8 107 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 KCND2Q9NZV8 630 aa23.6■■□□□ 1.37
CASC4-204ENST00000557945 USP25Q9UHP3 1055 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms