RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CHAMP1Q96JM3 812 aa28.5■■■□□ 2.15
SMAD6-202ENST00000557916 CIZ1Q9ULV3 898 aaPredicted RBP28.5■■■□□ 2.15
SMAD6-202ENST00000557916 PARNO95453 639 aaKnown RBP28.49■■■□□ 2.15
SMAD6-202ENST00000557916 RFC2P35250 354 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 KRT85P78386 507 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 MRPS6P82932 125 aaKnown RBP28.49■■■□□ 2.15
SMAD6-202ENST00000557916 FAM26DQ5JW98 314 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 HYIQ5T013 277 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 IER5Q5VY09 327 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 MAP7D2Q96T17 732 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 NT5C3AQ9H0P0 336 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 DHX33Q9H6R0 707 aaKnown RBP28.49■■■□□ 2.15
SMAD6-202ENST00000557916 RCOR1Q9UKL0 485 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 DNM3Q9UQ16 869 aa28.49■■■□□ 2.15
SMAD6-202ENST00000557916 SLC26A4O43511 780 aa28.48■■■□□ 2.15
SMAD6-202ENST00000557916 TMEM62Q0P6H9 643 aa28.48■■■□□ 2.15
SMAD6-202ENST00000557916 CALML4Q96GE6 196 aa28.48■■■□□ 2.15
SMAD6-202ENST00000557916 EPSTI1Q96J88 318 aa28.48■■■□□ 2.15
SMAD6-202ENST00000557916 PNMA5Q96PV4 448 aa28.48■■■□□ 2.15
SMAD6-202ENST00000557916 AKT3Q9Y243 479 aa28.48■■■□□ 2.15
SMAD6-202ENST00000557916 M0QZ92 97 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 CHRNA1P02708 482 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 DNM2P50570 870 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 GRB10Q13322 594 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 CHRDL2Q6WN34 429 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 DEFB128Q7Z7B8 93 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 RPUSD2Q8IZ73 545 aaKnown RBP28.47■■■□□ 2.15
SMAD6-202ENST00000557916 PLIN2Q99541 437 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 UBE2OQ9C0C9 1292 aaKnown RBP28.47■■■□□ 2.15
SMAD6-202ENST00000557916 IL23AQ9NPF7 189 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 BMP2KQ9NSY1 1161 aaPredicted RBP28.47■■■□□ 2.15
SMAD6-202ENST00000557916 CDY2AQ9Y6F7 541 aa28.47■■■□□ 2.15
SMAD6-202ENST00000557916 ARHGEF35A5YM69 484 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 E9PMD0 336 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 DGAT1O75907 488 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 VTNP04004 478 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 EPHB4P54760 987 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 MGAT3Q09327 533 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 MKRN4PQ13434 485 aaPredicted RBP28.46■■■□□ 2.15
SMAD6-202ENST00000557916 MBTPS1Q14703 1052 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 EMC2Q15006 297 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 USP49Q70CQ1 688 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 KCTD17Q8N5Z5 321 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 RASSF8Q8NHQ8 419 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 SYMPKQ92797 1274 aaKnown RBP28.46■■■□□ 2.15
SMAD6-202ENST00000557916 CCSER1Q9C0I3 900 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 BHMT2Q9H2M3 363 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 EVPLQ92817 2033 aa28.46■■■□□ 2.15
SMAD6-202ENST00000557916 CUTAO60888 179 aa28.45■■■□□ 2.15
SMAD6-202ENST00000557916 NBNO60934 754 aa28.45■■■□□ 2.15
SMAD6-202ENST00000557916 ACRP10323 421 aa28.45■■■□□ 2.15
SMAD6-202ENST00000557916 ME1P48163 572 aa28.45■■■□□ 2.15
SMAD6-202ENST00000557916 DRP2Q13474 957 aa28.45■■■□□ 2.15
SMAD6-202ENST00000557916 GPNMBQ14956 572 aa28.45■■■□□ 2.15
SMAD6-202ENST00000557916 TMEM119Q4V9L6 283 aa28.45■■■□□ 2.15
SMAD6-202ENST00000557916 CELF4Q9BZC1 486 aaKnown RBP28.45■■■□□ 2.15
SMAD6-202ENST00000557916 TRPV2Q9Y5S1 764 aa28.45■■■□□ 2.15
SMAD6-202ENST00000557916 EYA4O95677 639 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 BMP8BP34820 402 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 KARSQ15046 597 aaKnown RBP28.44■■■□□ 2.14
SMAD6-202ENST00000557916 C16orf59Q7L2K0 433 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 KCNK18Q7Z418 384 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 LEO1Q8WVC0 666 aaPredicted RBP28.44■■■□□ 2.14
SMAD6-202ENST00000557916 SPATA32Q96LK8 384 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 MTRQ99707 1265 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 TANC1Q9C0D5 1861 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 ATP6V0A4Q9HBG4 840 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 SUCLA2Q9P2R7 463 aaPredicted RBP28.44■■■□□ 2.14
SMAD6-202ENST00000557916 PCDHA7Q9UN72 937 aa28.44■■■□□ 2.14
SMAD6-202ENST00000557916 GAS2O43903 313 aaKnown RBP28.43■■■□□ 2.14
SMAD6-202ENST00000557916 USO1O60763 962 aaKnown RBP28.43■■■□□ 2.14
SMAD6-202ENST00000557916 TXLNAP40222 546 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 PADI6Q6TGC4 694 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 TMEM143Q96AN5 459 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 VWCEQ96DN2 955 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 IPO9Q96P70 1041 aaKnown RBP28.43■■■□□ 2.14
SMAD6-202ENST00000557916 PPP1R16BQ96T49 567 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 SCAND2PQ9GZW5 306 aaPredicted RBP28.43■■■□□ 2.14
SMAD6-202ENST00000557916 XPNPEP1Q9NQW7 623 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 GINS2Q9Y248 185 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 CXCL10P02778 98 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 PFKMP08237 780 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 KIZQ2M2Z5 673 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 AXDND1Q5T1B0 1012 aaPredicted RBP28.43■■■□□ 2.14
SMAD6-202ENST00000557916 TCP11Q8WWU5 503 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 CHMP5Q9NZZ3 219 aa28.43■■■□□ 2.14
SMAD6-202ENST00000557916 ARID2Q68CP9 1835 aa28.42■■■□□ 2.14
SMAD6-202ENST00000557916 NLRP11P59045 1033 aaKnown RBP28.42■■■□□ 2.14
SMAD6-202ENST00000557916 PSRC1Q6PGN9 363 aaPredicted RBP28.42■■■□□ 2.14
SMAD6-202ENST00000557916 ZNF710Q8N1W2 664 aa28.42■■■□□ 2.14
SMAD6-202ENST00000557916 OSBPL7Q9BZF2 842 aa28.42■■■□□ 2.14
SMAD6-202ENST00000557916 PRO3102Q9H379 93 aa28.42■■■□□ 2.14
SMAD6-202ENST00000557916 CDHR5Q9HBB8 845 aa28.42■■■□□ 2.14
SMAD6-202ENST00000557916 CCDC39Q9UFE4 941 aa28.42■■■□□ 2.14
SMAD6-202ENST00000557916 SCN5AQ14524 2016 aa28.42■■■□□ 2.14
SMAD6-202ENST00000557916 GPR32O75388 356 aa28.41■■■□□ 2.14
SMAD6-202ENST00000557916 PLCG1P19174 1290 aa28.41■■■□□ 2.14
SMAD6-202ENST00000557916 CDC42EP1Q00587 391 aa28.41■■■□□ 2.14
SMAD6-202ENST00000557916 FBXO47Q5MNV8 452 aa28.41■■■□□ 2.14
SMAD6-202ENST00000557916 TMEM240Q5SV17 173 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms