RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 ANGEL2Q5VTE6 544 aaKnown RBP14.41□□□□□ -0.1
CPNE6-204ENST00000557829 SIAH1Q8IUQ4 282 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 FAM133AQ8N9E0 248 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 C3orf20Q8ND61 904 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 PSTPIP2Q9H939 334 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 NENFQ9UMX5 172 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 E9PMD0 336 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 RAD51CO43502 376 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 KRT14P02533 472 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 NR1D1P20393 614 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 INPP5BP32019 993 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 LSP1P33241 339 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 SLC12A3P55017 1021 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 NPEPPSP55786 919 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 TNFAIP1Q13829 316 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 UBE2SQ16763 222 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 RNPC3Q96LT9 517 aaKnown RBP14.41□□□□□ -0.1
CPNE6-204ENST00000557829 MYCBPQ99417 103 aaPredicted RBP14.41□□□□□ -0.1
CPNE6-204ENST00000557829 DEFB129Q9H1M3 183 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 TMBIM4Q9HC24 238 aa14.41□□□□□ -0.1
CPNE6-204ENST00000557829 ANKRD65E5RJM6 399 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 TBX3O15119 743 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 TBC1D12O60347 775 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 GFPT2O94808 682 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 AFPP02771 609 aaKnown RBP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 SSBP05455 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 EEF2P13639 858 aaKnown RBP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 MDH1P40925 334 aaKnown RBP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 PDCLQ13371 301 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 TMEM179Q6ZVK1 233 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 SLFN11Q7Z7L1 901 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 NELFCDQ8IXH7 590 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 KCTD17Q8N5Z5 321 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 LRRC57Q8N9N7 239 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 FGFBP2Q9BYJ0 223 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 METTL14Q9HCE5 456 aaKnown RBP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 GGA3Q9NZ52 723 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 PDXKO00764 312 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 CALUO43852 315 aaPredicted RBP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 PPP1R37O75864 691 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 PTGISQ16647 500 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 PRAMEF18Q5VWM3 479 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 EPM2AIP1Q7L775 607 aaPredicted RBP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 RASGEF1CQ8N431 466 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 PACSIN1Q9BY11 444 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 KANSL2Q9H9L4 492 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 NMRK2Q9NPI5 230 aa14.4□□□□□ -0.1
CPNE6-204ENST00000557829 ARMCX3Q9UH62 379 aaPredicted RBP14.4□□□□□ -0.1
CPNE6-204ENST00000557829 GTPBP10A4D1E9 387 aaKnown RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ZSCAN5CA6NGD5 496 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 GOLGA6L10A6NI86 522 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 SLC16A3O15427 465 aaKnown RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 MEFVO15553 781 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 FLOT1O75955 427 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ZBTB48P10074 688 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 UCHL3P15374 230 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ERCC3P19447 782 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 NR2F2P24468 414 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 MAP3K10Q02779 954 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ICA1Q05084 483 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 PTK2Q05397 1052 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ITGB3BPQ13352 177 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 MTMR3Q13615 1198 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 KNOP1Q1ED39 458 aaKnown RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 BMT2Q1RMZ1 405 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ARSHQ5FYA8 562 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 RUFY4Q6ZNE9 571 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ZNF571Q7Z3V5 609 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 VPS36Q86VN1 386 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 SYCE1Q8N0S2 351 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 SH2D3CQ8N5H7 860 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ERMNQ8TAM6 284 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 TBC1D7Q9P0N9 293 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 NAGPAQ9UK23 515 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 ESYT3A0FGR9 886 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 KCNK3O14649 394 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 KIAA0754O94854 1291 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 FSBPO95073 299 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 GUCY2FP51841 1108 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 AP3B2Q13367 1082 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 BIRC3Q13489 604 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 EXOC3L4Q17RC7 722 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 NBPF12Q5TAG4 269 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 KCTD16Q68DU8 428 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 SYT2Q8N9I0 419 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 SPAG5Q96R06 1193 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 SLITRK6Q9H5Y7 841 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 SUCLA2Q9P2R7 463 aaPredicted RBP14.39□□□□□ -0.11
CPNE6-204ENST00000557829 PLAAQ9Y263 795 aa14.39□□□□□ -0.11
CPNE6-204ENST00000557829 POTEB3A0JP26 581 aa14.38□□□□□ -0.11
CPNE6-204ENST00000557829 POTECB2RU33 542 aa14.38□□□□□ -0.11
CPNE6-204ENST00000557829 PGRMC1O00264 195 aaKnown RBP14.38□□□□□ -0.11
CPNE6-204ENST00000557829 RAD21O60216 631 aa14.38□□□□□ -0.11
CPNE6-204ENST00000557829 RPL13P26373 211 aaKnown RBP14.38□□□□□ -0.11
CPNE6-204ENST00000557829 PON1P27169 355 aa14.38□□□□□ -0.11
CPNE6-204ENST00000557829 ECHS1P30084 290 aa14.38□□□□□ -0.11
CPNE6-204ENST00000557829 ATP1A2P50993 1020 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms