RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 PRR16Q569H4 304 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 PRRT3Q5FWE3 981 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 TLDC1Q6P9B6 456 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 OGFOD3Q6PK18 319 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 LINC00114Q6XXX2 140 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 PHYKPLQ8IUZ5 450 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 MYCT1Q8N699 235 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 UHMK1Q8TAS1 419 aaKnown RBP8.36□□□□□ -1.07
ZEB1-210ENST00000557827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.36□□□□□ -1.07
ZEB1-210ENST00000557827 PHKBQ93100 1093 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 TRIM63Q969Q1 353 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 TBATAQ96M53 351 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 PRDM12Q9H4Q4 367 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 CERS4Q9HA82 394 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 IFT122Q9HBG6 1241 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 NOP53Q9NZM5 478 aaKnown RBP8.36□□□□□ -1.07
ZEB1-210ENST00000557827 GPR52Q9Y2T5 361 aa8.36□□□□□ -1.07
ZEB1-210ENST00000557827 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-210ENST00000557827 HTRA2O43464 458 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-210ENST00000557827 BUB1BO60566 1050 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-210ENST00000557827 DDIT3P35638 169 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 MAPK9P45984 424 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 BCAR1P56945 870 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 SETQ01105 290 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-210ENST00000557827 SNX17Q15036 470 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 GAB4Q2WGN9 574 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 UVSSAQ2YD98 709 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 ZBTB41Q5SVQ8 909 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 L1TD1Q5T7N2 865 aaKnown RBP8.35□□□□□ -1.07
ZEB1-210ENST00000557827 LCE2AQ5TA79 106 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-210ENST00000557827 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 IZUMO3Q5VZ72 239 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 HLA-DQA1Q5Y7H0 255 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 MZT2AQ6P582 158 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 MAEAQ7L5Y9 396 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 DAAM2Q86T65 1068 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 COL23A1Q86Y22 540 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-210ENST00000557827 FAM20CQ8IXL6 584 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 C7orf31Q8N865 590 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 PLEKHO2Q8TD55 490 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 MYRFLQ96LU7 910 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 WNT8AQ9H1J5 351 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 MYLK2Q9H1R3 596 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 POFUT1Q9H488 388 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 ERVK13-1Q9NX77 482 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.35□□□□□ -1.07
ZEB1-210ENST00000557827 DPP7Q9UHL4 492 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 USP21Q9UK80 565 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 TMPRSS11EQ9UL52 423 aa8.35□□□□□ -1.07
ZEB1-210ENST00000557827 FAM90A27PA6NNH2 459 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 KRIT1O00522 736 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 NCK2O43639 380 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 FUCA1P04066 466 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 DDX10Q13206 875 aaKnown RBP8.34□□□□□ -1.07
ZEB1-210ENST00000557827 TUSC3Q13454 348 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 POLD3Q15054 466 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-210ENST00000557827 FAM209BQ5JX69 171 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 KCTD1Q719H9 257 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-210ENST00000557827 IL17REQ8NFR9 667 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 ZSCAN18Q8TBC5 510 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-210ENST00000557827 TSPEARQ8WU66 669 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 UTP4Q969X6 686 aaKnown RBP8.34□□□□□ -1.07
ZEB1-210ENST00000557827 LENG1Q96BZ8 264 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-210ENST00000557827 EIF2AK1Q9BQI3 630 aaKnown RBP8.34□□□□□ -1.07
ZEB1-210ENST00000557827 KCTD10Q9H3F6 313 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 KCNF1Q9H3M0 494 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 DCP1AQ9NPI6 582 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-210ENST00000557827 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
ZEB1-210ENST00000557827 FOXP2O15409 715 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 EPB41L2O43491 1005 aaKnown RBP8.33□□□□□ -1.08
ZEB1-210ENST00000557827 ZNF500O60304 480 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-210ENST00000557827 C4BPAP04003 597 aaKnown RBP8.33□□□□□ -1.08
ZEB1-210ENST00000557827 MYF5P13349 255 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 PTPN1P18031 435 aaKnown RBP8.33□□□□□ -1.08
ZEB1-210ENST00000557827 LGALS4P56470 323 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 CDK17Q00537 523 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 ANO4Q32M45 955 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 DACT2Q5SW24 774 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 RBM12BQ8IXT5 1001 aaKnown RBP8.33□□□□□ -1.08
ZEB1-210ENST00000557827 FAM9BQ8IZU0 186 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 ARMC10Q8N2F6 343 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 KLHDC4Q8TBB5 520 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 GATA6Q92908 595 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 FERMT2Q96AC1 680 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 GCC1Q96CN9 775 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 MAML3Q96JK9 1138 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 DUSP13Q9UII6 198 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 CORO2BQ9UQ03 480 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 NUMBLQ9Y6R0 609 aa8.33□□□□□ -1.08
ZEB1-210ENST00000557827 A0A087WV62 115 aa8.32□□□□□ -1.08
ZEB1-210ENST00000557827 EXOC5O00471 708 aa8.32□□□□□ -1.08
ZEB1-210ENST00000557827 GNB5O14775 395 aa8.32□□□□□ -1.08
ZEB1-210ENST00000557827 TNFAIP3P21580 790 aa8.32□□□□□ -1.08
ZEB1-210ENST00000557827 RPL10P27635 214 aaKnown RBP8.32□□□□□ -1.08
ZEB1-210ENST00000557827 NOS3P29474 1203 aa8.32□□□□□ -1.08
ZEB1-210ENST00000557827 GJA4P35212 333 aa8.32□□□□□ -1.08
ZEB1-210ENST00000557827 EPHA5P54756 1037 aa8.32□□□□□ -1.08
ZEB1-210ENST00000557827 NRG1Q02297 640 aaPredicted RBP8.32□□□□□ -1.08
ZEB1-210ENST00000557827 TBX2Q13207 712 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms