RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RFFLQ8WZ73 363 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 CCT6BQ92526 530 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 SLC35C1Q96A29 364 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 FAM129AQ9BZQ8 928 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 AJAP1Q9UKB5 411 aaPredicted RBP12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 DNM3Q9UQ16 869 aa12.84□□□□□ -0.35
VIPAS39-211ENST00000557658 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 CTNND1O60716 968 aaKnown RBP12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 ATP2C2O75185 946 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 RPS6KA4O75676 772 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 DNAJC8O75937 253 aaPredicted RBP12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 NF2P35240 595 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 HOXD13P35453 343 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 DR1Q01658 176 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 CLUL1Q15846 466 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 SLC51AQ86UW1 340 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 CCDC197Q8NCU1 140 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 ATP8B4Q8TF62 1192 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 REEP2Q9BRK0 252 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 DAAM1Q9Y4D1 1078 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 FOCADQ5VW36 1801 aa12.83□□□□□ -0.35
VIPAS39-211ENST00000557658 GAKO14976 1311 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 CYP3A7-CYP3A51PA0A087WV96 503 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 FAM187AA6NFU0 413 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L10C9JJH3 530 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 C21orf2O43822 256 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 CAND2O75155 1236 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 NUDT17P0C025 328 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 TMEM253P0C7T8 217 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 CYP3A7P24462 503 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 SLC16A2P36021 539 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 PRPF4BQ13523 1007 aaKnown RBP12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 BMT2Q1RMZ1 405 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 GJB7Q6PEY0 223 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 CATSPER3Q86XQ3 398 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 CLEC10AQ8IUN9 316 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 ANKS4BQ8N8V4 417 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 SYT2Q8N9I0 419 aaPredicted RBP12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 SLC30A5Q8TAD4 765 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 LNX1Q8TBB1 728 aaPredicted RBP12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 SLC35G2Q8TBE7 412 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 MDM1Q8TC05 714 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 CTNNBL1Q8WYA6 563 aaPredicted RBP12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 ERP44Q9BS26 406 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 CARD9Q9H257 536 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 PNMA2Q9UL42 364 aa12.83□□□□□ -0.36
VIPAS39-211ENST00000557658 CCDC169A6NNP5 214 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 F8W031 263 aaPredicted RBP12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 DDX3YO15523 660 aaKnown RBP12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 EVI5O60447 810 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 RFC4P35249 363 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 GABPAQ06546 454 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 MFSD14BQ5SR56 506 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 DUPD1Q68J44 220 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 CEP57Q86XR8 500 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 NEK9Q8TD19 979 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 PGM2Q96G03 612 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 MBOAT7Q96N66 472 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 ANO3Q9BYT9 981 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 GOPCQ9HD26 462 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 OSGEPQ9NPF4 335 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 TPX2Q9ULW0 747 aaKnown RBP12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 ASTN1O14525 1302 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 SPDYE3A6NKU9 549 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 CCT8L1PA6NM43 557 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L15C9J2P7 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L13C9JLJ4 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L11C9JVI0 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L18D6R9N7 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L22D6RA61 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L17D6RBQ6 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L19D6RCP7 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L20D6RJB6 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 TRIM37O94972 964 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 IL1R1P14778 569 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 EZRP15311 586 aaKnown RBP12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 SLC8A1P32418 973 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 SOX5P35711 763 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 CASP4P49662 377 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 PMS2P54278 862 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L24Q0WX57 530 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 DHX34Q14147 1143 aaKnown RBP12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 KCTD19Q17RG1 926 aaPredicted RBP12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 USP17L6PQ6QN14 398 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 MOXD1Q6UVY6 613 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 SCLT1Q96NL6 688 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 PABPC3Q9H361 631 aaKnown RBP12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 LRRC4CQ9HCJ2 640 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 ZDHHC18Q9NUE0 388 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 RASAL2Q9UJF2 1139 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 ODF2LQ9ULJ1 636 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
VIPAS39-211ENST00000557658 TBCAO75347 108 aaKnown RBP12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 UFL1O94874 794 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms