RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 SPTLC1O15269 473 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 LILRB5O75023 590 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 PCP11498 1178 aaKnown RBP11.56□□□□□ -0.56
ABCD4-227ENST00000557554 SRFP11831 508 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 IBSPP21815 317 aaPredicted RBP11.56□□□□□ -0.56
ABCD4-227ENST00000557554 DSC3Q14574 896 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 LETM2Q2VYF4 491 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 PPM1JQ5JR12 505 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 MFSD6Q6ZSS7 791 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 GPR152Q8TDT2 470 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 GPATCH3Q96I76 525 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 EPC1Q9H2F5 836 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 SMARCAD1Q9H4L7 1026 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 ATP6V0A4Q9HBG4 840 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 UNC79Q9P2D8 2635 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 FBXO4Q9UKT5 387 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 ST3GAL5Q9UNP4 418 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 PCDHGA2Q9Y5H1 932 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 DOCK8Q8NF50 2099 aa11.56□□□□□ -0.56
ABCD4-227ENST00000557554 CNOT1A5YKK6 2376 aaKnown RBP11.55□□□□□ -0.56
ABCD4-227ENST00000557554 DENND3A2RUS2 1198 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 M0QZ92 97 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 DHX16O60231 1041 aaKnown RBP11.55□□□□□ -0.56
ABCD4-227ENST00000557554 LRRN2O75325 713 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 RPS6KA5O75582 802 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 PARP1P09874 1014 aaKnown RBP11.55□□□□□ -0.56
ABCD4-227ENST00000557554 KCNA2P16389 499 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 STARD6P59095 220 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 HAND2P61296 217 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 PCNX4Q63HM2 1172 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 CCDC149Q6ZUS6 474 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 TBC1D10CQ8IV04 446 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 GIMAP8Q8ND71 665 aaPredicted RBP11.55□□□□□ -0.56
ABCD4-227ENST00000557554 PJA1Q8NG27 643 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 TRAPPC12Q8WVT3 735 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 GLG1Q92896 1179 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 ZBP1Q9H171 429 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 CHMP4BQ9H444 224 aaKnown RBP11.55□□□□□ -0.56
ABCD4-227ENST00000557554 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 EPS15L1Q9UBC2 864 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
ABCD4-227ENST00000557554 BAZ2BQ9UIF8 2168 aaKnown RBP11.55□□□□□ -0.56
ABCD4-227ENST00000557554 ZMYM6O95789 1325 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 TTC41PQ6P2S7 1318 aa11.55□□□□□ -0.56
ABCD4-227ENST00000557554 KLRF2D3W0D1 207 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 SLC30A4O14863 429 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 WTAPQ15007 396 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 MTHFD1LQ6UB35 978 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 C15orf39Q6ZRI6 1047 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 CABP7Q86V35 215 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 KIAA0319LQ8IZA0 1049 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 ENAHQ8N8S7 591 aaPredicted RBP11.54□□□□□ -0.56
ABCD4-227ENST00000557554 AUTS2Q8WXX7 1259 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 ESR2Q92731 530 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 NXPE3Q969Y0 559 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 NEDD4P46934 1319 aa11.54□□□□□ -0.56
ABCD4-227ENST00000557554 EVPLQ92817 2033 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 PATJQ8NI35 1801 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 GPR182O15218 404 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 CTSAP10619 480 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 PMLP29590 882 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 SHC2P98077 582 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 PLCB4Q15147 1175 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 DCLRE1AQ6PJP8 1040 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 TMEM173Q86WV6 379 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-227ENST00000557554 MIER1Q8N108 512 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 VPS52Q8N1B4 723 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 OTUD7AQ8TE49 926 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-227ENST00000557554 ATRIPQ8WXE1 791 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 ZSCAN10Q96SZ4 725 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-227ENST00000557554 DDX23Q9BUQ8 820 aaKnown RBP11.53□□□□□ -0.56
ABCD4-227ENST00000557554 FOXQ1Q9C009 403 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 SFXN1Q9H9B4 322 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 ARHGEF3Q9NR81 526 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 SLC2A4RGQ9NR83 387 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 HELLSQ9NRZ9 838 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 MAD2L2Q9UI95 211 aa11.53□□□□□ -0.56
ABCD4-227ENST00000557554 SMG5Q9UPR3 1016 aaKnown RBP11.53□□□□□ -0.56
ABCD4-227ENST00000557554 CEP295Q9C0D2 2601 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.52□□□□□ -0.57
ABCD4-227ENST00000557554 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
ABCD4-227ENST00000557554 TRIM6-TRIM34B2RNG4 842 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 NT5C1B-RDH14C9J2C7 533 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 ANHXE9PGG2 379 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 ITGB5P18084 799 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 CLCN4P51793 760 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 POLGP54098 1239 aaPredicted RBP11.52□□□□□ -0.57
ABCD4-227ENST00000557554 BCAR1P56945 870 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 GIT2Q14161 759 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 NONOQ15233 471 aaKnown RBP eCLIP11.52□□□□□ -0.57
ABCD4-227ENST00000557554 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 CCDC178Q5BJE1 867 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 CLLU1OSQ5K130 101 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 DDX53Q86TM3 631 aaKnown RBP11.52□□□□□ -0.57
ABCD4-227ENST00000557554 FAM228AQ86W67 206 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 LRRC43Q8N309 656 aa11.52□□□□□ -0.57
ABCD4-227ENST00000557554 SECISBP2LQ93073 1101 aaKnown RBP11.52□□□□□ -0.57
ABCD4-227ENST00000557554 GPRASP2Q96D09 838 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms