RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 BMP3P12645 472 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 FAM47EQ6ZV65 393 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 SCYL3Q8IZE3 742 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 DLG5Q8TDM6 1919 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 SMIM24O75264 130 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 BAG2O95816 211 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 ARHGAP4P98171 946 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 RPUSD2Q8IZ73 545 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 CFAP61Q8NHU2 1237 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 SGK1O00141 431 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 HNRNPDLO14979 420 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 ALAS1P13196 640 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 APBB1IPQ7Z5R6 666 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 CXorf56Q9H5V9 222 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 ARHGAP20Q9P2F6 1191 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 SOX5P35711 763 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 DHX34Q14147 1143 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 AGBL2Q5U5Z8 902 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 CCDC137Q6PK04 289 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 VCX3BQ9H321 246 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 PNMA2Q9UL42 364 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 CA4P22748 312 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 AARSP49588 968 aaKnown RBP eCLIP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 TMEM139Q8IV31 216 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 ARHGAP42A6NI28 874 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 FTLP02792 175 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 CHN1P15882 459 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 HSD17B3P37058 310 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 PIK3CAP42336 1068 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 AP1ARQ63HQ0 302 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 ZNF746Q6NUN9 644 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 SH3RF1Q7Z6J0 888 aa16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 SDCCAG8Q86SQ7 713 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 SRRM1Q8IYB3 904 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 MPHOSPH6Q99547 160 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 INTS2Q9H0H0 1204 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-207ENST00000556399 GOLGA8IPA6NC78 632 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 GOLGA8JA6NMD2 632 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 SLC9A1P19634 815 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 FGFR2P21802 821 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 GALCP54803 685 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 SYN2Q92777 582 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 CFAP73A6NFT4 308 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 FGFR4P22455 802 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 DEPTORQ8TB45 409 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 MYCBPAPQ8TBZ2 947 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 HDAC7Q8WUI4 952 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 XPO6Q96QU8 1125 aaKnown RBP16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 NBPF3Q9H094 633 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 ECT2Q9H8V3 914 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 TMOD4Q9NZQ9 345 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 JCADQ9P266 1359 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 MAPK13O15264 365 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 GCLMP48507 274 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 RNASELQ05823 741 aaKnown RBP16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 HADHQ16836 314 aaKnown RBP16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 PACS2Q86VP3 889 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 PRMT1Q99873 361 aaKnown RBP16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 SLC40A1Q9NP59 571 aa16.17■□□□□ 0.18
ARHGEF40-207ENST00000556399 STAM2O75886 525 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 KRT19P08727 400 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 TRIM49P0CI25 452 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 TRIM49CP0CI26 452 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 CCDC14Q49A88 953 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 PCDHB4Q9Y5E5 795 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 FAM205AQ6ZU69 1335 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 LRRC10BA6NIK2 292 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 PDXKO00764 312 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 BRAFP15056 766 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 ALDH1B1P30837 517 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 USP11P51784 963 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 CASC4Q6P4E1 433 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 SLC35G2Q8TBE7 412 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 CELF4Q9BZC1 486 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 TRIM6Q9C030 488 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 SEMA6BQ9H3T3 888 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 CD209Q9NNX6 404 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 MAD2L2Q9UI95 211 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 RASA4BC9J798 803 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 RASA4O43374 803 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 ZBED4O75132 1171 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 TTBK2Q6IQ55 1244 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 CALR3Q96L12 384 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 FAM20AQ96MK3 541 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 ANAPC7Q9UJX3 599 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 A0A087X0T9 212 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 BBOX1O75936 387 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 FAM228BP0C875 321 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 DAGLBQ8NCG7 672 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 RIOK1Q9BRS2 568 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 CNOT8Q9UFF9 292 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 GGT7Q9UJ14 662 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 SIGLEC1Q9BZZ2 1709 aa16.16■□□□□ 0.18
ARHGEF40-207ENST00000556399 WDR91A4D1P6 747 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 ADGRA1Q86SQ6 560 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 KCNG1Q9UIX4 513 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms