RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 BCL6BQ8N143 479 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-218ENST00000556256 NTN5Q8WTR8 489 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-218ENST00000556256 KIAA1522Q9P206 1035 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-218ENST00000556256 TRAF5O00463 557 aa5.55□□□□□ -1.52
SCFD1-218ENST00000556256 FAM20BO75063 409 aa5.55□□□□□ -1.52
SCFD1-218ENST00000556256 RHOBTB3O94955 611 aa5.55□□□□□ -1.52
SCFD1-218ENST00000556256 LMNAP02545 664 aaKnown RBP5.55□□□□□ -1.52
SCFD1-218ENST00000556256 MFAP1P55081 439 aaKnown RBP5.55□□□□□ -1.52
SCFD1-218ENST00000556256 ST5P78524 1137 aa5.55□□□□□ -1.52
SCFD1-218ENST00000556256 CRY1Q16526 586 aa5.55□□□□□ -1.52
SCFD1-218ENST00000556256 DDR2Q16832 855 aa5.55□□□□□ -1.52
SCFD1-218ENST00000556256 MTDHQ86UE4 582 aaKnown RBP5.55□□□□□ -1.52
SCFD1-218ENST00000556256 HNRNPLLQ8WVV9 542 aaKnown RBP5.55□□□□□ -1.52
SCFD1-218ENST00000556256 SMURF1Q9HCE7 757 aa5.55□□□□□ -1.52
SCFD1-218ENST00000556256 R3HCC1Q9Y3T6 440 aaKnown RBP5.55□□□□□ -1.52
SCFD1-218ENST00000556256 AQP7O14520 342 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 SRGAP2CP0DJJ0 459 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 HOMEZQ8IX15 550 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 SLC25A43Q8WUT9 341 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-218ENST00000556256 ASB15Q8WXK1 588 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 ZNF764Q96H86 408 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-218ENST00000556256 GPR87Q9BY21 358 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 RIOX1Q9H6W3 641 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 PTGFRNQ9P2B2 879 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 PACSIN3Q9UKS6 424 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 VWA7Q9Y334 891 aa5.54□□□□□ -1.52
SCFD1-218ENST00000556256 PRAMEF22A3QJZ6 481 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 ARVCFO00192 962 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 FGRP09769 529 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 GUCY1A3Q02108 690 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 ELAVL1Q15717 326 aaKnown RBP5.53□□□□□ -1.52
SCFD1-218ENST00000556256 FAM111BQ6SJ93 734 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 GAREM2Q75VX8 874 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 RHOUQ7L0Q8 258 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 MAMDC2Q7Z304 686 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-218ENST00000556256 LENG9Q96B70 501 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 RPL10LQ96L21 214 aaKnown RBP5.53□□□□□ -1.52
SCFD1-218ENST00000556256 GPHA2Q96T91 129 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 SLC6A15Q9H2J7 730 aa5.53□□□□□ -1.52
SCFD1-218ENST00000556256 MASP2O00187 686 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 LACTBP83111 547 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-218ENST00000556256 TM4SF20Q53R12 229 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 RABL3Q5HYI8 236 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 PRIMA1Q86XR5 153 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 LRRC47Q8N1G4 583 aaKnown RBP5.52□□□□□ -1.53
SCFD1-218ENST00000556256 ZNF276Q8N554 614 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 ST13P5Q8NFI4 369 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-218ENST00000556256 PTPRN2Q92932 1015 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 LPPQ93052 612 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 GBP4Q96PP9 640 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 MLST8Q9BVC4 326 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 TRPS1Q9UHF7 1281 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 ZNHIT2Q9UHR6 403 aa5.52□□□□□ -1.53
SCFD1-218ENST00000556256 CCDC66A2RUB6 948 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 KLRG2A4D1S0 409 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-218ENST00000556256 C2orf78A6NCI8 922 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 GSTA4O15217 222 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 DNM2P50570 870 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 RABGGTBP53611 331 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 KLHDC10Q6PID8 442 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 ANKS3Q6ZW76 656 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 HIPK4Q8NE63 616 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 PCDHA9Q9Y5H5 950 aa5.51□□□□□ -1.53
SCFD1-218ENST00000556256 UBE2QL1A1L167 161 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 RASSF10A6NK89 507 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 GOLGA6L22H0YM25 854 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 SCDO00767 359 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 MAFO75444 373 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-218ENST00000556256 APEX1P27695 318 aaKnown RBP5.5□□□□□ -1.53
SCFD1-218ENST00000556256 C21orf58P58505 322 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 ADAM8P78325 824 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 SMAD3P84022 425 aaKnown RBP5.5□□□□□ -1.53
SCFD1-218ENST00000556256 MCF2L2Q86YR7 1114 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 ANKRD53Q8N9V6 530 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 SLC7A6OSQ96CW6 309 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-218ENST00000556256 MNTQ99583 582 aa5.5□□□□□ -1.53
SCFD1-218ENST00000556256 FOXP2O15409 715 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 KLF4O43474 513 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 H2AFYO75367 372 aaKnown RBP5.49□□□□□ -1.53
SCFD1-218ENST00000556256 NR4A1P22736 598 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 SESN2P58004 480 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-218ENST00000556256 BPIFB4P59827 614 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 MAP3K12Q12852 859 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 GNL2Q13823 731 aaKnown RBP5.49□□□□□ -1.53
SCFD1-218ENST00000556256 PTPAQ15257 358 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 FAM47CQ5HY64 1035 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 ZKSCAN2Q63HK3 967 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 FSTL4Q6MZW2 842 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 GLCCI1Q86VQ1 547 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 NOSTRINQ8IVI9 506 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 PROKR1Q8TCW9 393 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 CALML6Q8TD86 181 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 GCDHQ92947 438 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-218ENST00000556256 ADARB2Q9NS39 739 aaKnown RBP5.49□□□□□ -1.53
SCFD1-218ENST00000556256 KCNH7Q9NS40 1196 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 MAGEL2Q9UJ55 1249 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 FZD1Q9UP38 647 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 ASB1Q9Y576 335 aa5.49□□□□□ -1.53
SCFD1-218ENST00000556256 RBM8AQ9Y5S9 174 aaKnown RBP5.49□□□□□ -1.53
SCFD1-218ENST00000556256 COL4A3Q01955 1670 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms