RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 C22orf31O95567 290 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 TMOD1P28289 359 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 DNM2P50570 870 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 CDK7P50613 346 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 IGBP1P78318 339 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 MDM2Q00987 491 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-221ENST00000555773 KLHL40Q2TBA0 621 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 ARSHQ5FYA8 562 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 FAM47CQ5HY64 1035 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 MARCH8Q5T0T0 291 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 SLC39A5Q6ZMH5 540 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 LMBR1Q8WVP7 490 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 ABHD8Q96I13 439 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 MTRQ99707 1265 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 SH2D3AQ9BRG2 576 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 C11orf49Q9H6J7 331 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 ATP6V0A4Q9HBG4 840 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 KCNG1Q9UIX4 513 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 PCDHA2Q9Y5H9 948 aa13.85□□□□□ -0.19
SHMT2-221ENST00000555773 MYMKA6NI61 221 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 USO1O60763 962 aaKnown RBP13.84□□□□□ -0.19
SHMT2-221ENST00000555773 RPLP2P05387 115 aaKnown RBP13.84□□□□□ -0.19
SHMT2-221ENST00000555773 KRT18P05783 430 aaKnown RBP13.84□□□□□ -0.19
SHMT2-221ENST00000555773 AFMP43652 599 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 CDC42EP1Q00587 391 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 EMC2Q15006 297 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 IER5Q5VY09 327 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 EFCAB12Q6NXP0 572 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 TAF2Q6P1X5 1199 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 NME8Q8N427 588 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 TCP11Q8WWU5 503 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 DDX12PQ92771 950 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 KIFAP3Q92845 792 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 PAWRQ96IZ0 340 aaKnown RBP13.84□□□□□ -0.19
SHMT2-221ENST00000555773 RUSC1Q9BVN2 902 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 TRIM9Q9C026 710 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 C17orf75Q9HAS0 396 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 TUBE1Q9UJT0 475 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 MROH7Q68CQ1 1323 aa13.84□□□□□ -0.19
SHMT2-221ENST00000555773 SMIM35A0A1B0GVV1 85 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 PVALEFA0A1B0GWK0 134 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 ASAP2O43150 1006 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 TREHO43280 583 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 TRAK2O60296 914 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 EN2P19622 333 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-221ENST00000555773 RTP1P59025 263 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 GIT2Q14161 759 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 POSTNQ15063 836 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 PTGISQ16647 500 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 GDF6Q6KF10 455 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-221ENST00000555773 METTL13Q8N6R0 699 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 TRAPPC12Q8WVT3 735 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 STAMQ92783 540 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 SYAP1Q96A49 352 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-221ENST00000555773 DNAJC19Q96DA6 116 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 DRC1Q96MC2 740 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 TOX2Q96NM4 488 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 CLSTN2Q9H4D0 955 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 XPNPEP1Q9NQW7 623 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.2
SHMT2-221ENST00000555773 DOCK5Q9H7D0 1870 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 HIP1RO75146 1068 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 SMC2O95347 1197 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 CYP2C9P11712 490 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 ARL2P36404 184 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 ZNF200P98182 395 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-221ENST00000555773 PTK7Q13308 1070 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 HIC1Q14526 733 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 MXD4Q14582 209 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-221ENST00000555773 SNX17Q15036 470 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 FAM102BQ5T8I3 360 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 DYMQ7RTS9 669 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 ANKRD33Q7Z3H0 272 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 UBE2Q1Q7Z7E8 422 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 RPAINQ86UA6 219 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 RSPH3Q86UC2 560 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 SERINC5Q86VE9 423 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 CCDC65Q8IXS2 484 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 GRAMD1CQ8IYS0 662 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 KIAA0319LQ8IZA0 1049 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 TNS4Q8IZW8 715 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 LINC01465Q8N7H1 131 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 DIS3LQ8TF46 1054 aaKnown RBP13.82□□□□□ -0.2
SHMT2-221ENST00000555773 NUP62CLQ9H1M0 184 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 SUCLA2Q9P2R7 463 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-221ENST00000555773 NOD1Q9Y239 953 aa13.82□□□□□ -0.2
SHMT2-221ENST00000555773 DCDC2CA8MYV0 355 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 TLR3O15455 904 aaKnown RBP13.81□□□□□ -0.2
SHMT2-221ENST00000555773 TBCAO75347 108 aaKnown RBP13.81□□□□□ -0.2
SHMT2-221ENST00000555773 GAP43P17677 238 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 ZNF131P52739 623 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 ASIC1P78348 528 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 DPYDQ12882 1025 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-221ENST00000555773 CUL4BQ13620 913 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 CCDC183Q5T5S1 534 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms