RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 FAM86B1E9PN63 330 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 FAM86B2P0C5J1 330 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 RFX1P22670 979 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 PPP2R5AQ15172 486 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 DCAF17Q5H9S7 520 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-209ENST00000555609 SIAH1Q8IUQ4 282 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 METTL13Q8N6R0 699 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 SLC30A5Q8TAD4 765 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 NAP1L3Q99457 506 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-209ENST00000555609 BHMT2Q9H2M3 363 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 FAM114A2Q9NRY5 505 aa17.63■□□□□ 0.41
TUBB3-209ENST00000555609 PACSIN2Q9UNF0 486 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-209ENST00000555609 FAM13AO94988 1023 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 KRT14P02533 472 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 TMEM253P0C7T8 217 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 SOX5P35711 763 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 ZNF76P36508 570 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 GUCY2FP51841 1108 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 ERVK-9P63128 1117 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 ENOX2Q16206 610 aaKnown RBP17.62■□□□□ 0.41
TUBB3-209ENST00000555609 TCERG1LQ5VWI1 586 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 RINT1Q6NUQ1 792 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 KLHL7Q8IXQ5 586 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 HES6Q96HZ4 224 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 AMFRQ9UKV5 643 aa17.62■□□□□ 0.41
TUBB3-209ENST00000555609 NOC2LQ9Y3T9 749 aaKnown RBP17.62■□□□□ 0.41
TUBB3-209ENST00000555609 ESYT3A0FGR9 886 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 MEIS1O00470 390 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 DDX3XO00571 662 aaKnown RBP eCLIP17.61■□□□□ 0.412e-8■■□□□ 13.3
TUBB3-209ENST00000555609 NDUFAB1O14561 156 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 SART1O43290 800 aaKnown RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 TGFB1I1O43294 461 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 BMP3P12645 472 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 ABCB5Q2M3G0 1257 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 AGBL2Q5U5Z8 902 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 YTHDF3Q7Z739 585 aaKnown RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 NT5DC3Q86UY8 548 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 P2RX7Q99572 595 aaKnown RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 RUSC1Q9BVN2 902 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 EHMT1Q9H9B1 1298 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 PLAAQ9Y263 795 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 ZSCAN5CA6NGD5 496 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 GCOM1H8Y6P7 765 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 TULP1O00294 542 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 KRIT1O00522 736 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 NDUFB10O96000 172 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 MYZAPP0CAP1 466 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 LSP1P33241 339 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 MDH1P40925 334 aaKnown RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 DNA2P51530 1060 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 PPP2R5CQ13362 524 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 HLTFQ14527 1009 aaKnown RBP eCLIP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 STRIP1Q5VSL9 837 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 C1orf186Q6ZWK4 172 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 ZFPM1Q8IX07 1006 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 RNPC3Q96LT9 517 aaKnown RBP17.61■□□□□ 0.41
TUBB3-209ENST00000555609 PLEKHA4Q9H4M7 779 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 PARVGQ9HBI0 331 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 ODF2LQ9ULJ1 636 aa17.61■□□□□ 0.41
TUBB3-209ENST00000555609 COL2A1P02458 1487 aaPredicted RBP17.6■□□□□ 0.41
TUBB3-209ENST00000555609 PPP1R37O75864 691 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 ECHS1P30084 290 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 PDE6BP35913 854 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 ZNF131P52739 623 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 ITGB3BPQ13352 177 aaPredicted RBP17.6■□□□□ 0.41
TUBB3-209ENST00000555609 DOK7Q18PE1 504 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 HS2ST1Q7LGA3 356 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 SLC9A9Q8IVB4 645 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 RFFLQ8WZ73 363 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 DMAC2Q9NW81 257 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
TUBB3-209ENST00000555609 ATRNL1Q5VV63 1379 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 SIPA1L1O43166 1804 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 DDTLA6NHG4 134 aaPredicted RBP17.59■□□□□ 0.41
TUBB3-209ENST00000555609 TMCO5BA8MYB1 307 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 RAD21O60216 631 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 ENTPD3O75355 529 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 HSD17B3P37058 310 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 CASP4P49662 377 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 PDCLQ13371 301 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 TCEAL1Q15170 157 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 CEP85LQ5SZL2 805 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 OTOP1Q7RTM1 612 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 U2AF1L4Q8WU68 220 aaKnown RBP17.59■□□□□ 0.41
TUBB3-209ENST00000555609 TMEM174Q8WUU8 243 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 KCNQ5Q9NR82 932 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 SERPINA10Q9UK55 444 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 FRMD4BQ9Y2L6 1034 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 PCDHB13Q9Y5F0 798 aa17.59■□□□□ 0.41
TUBB3-209ENST00000555609 IGLV3-22A0A075B6J6 115 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 RSPH10B2B2RC85 870 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 F8VZ95 297 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 H0YGN5 161 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 EVI5O60447 810 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 RSPH10BP0C881 870 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 FMO5P49326 533 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms