RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ARHGAP20Q9P2F6 1191 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 TNFRSF18Q9Y5U5 241 aa7.35□□□□□ -1.23
VRK1-205ENST00000555402 FAM83GA6ND36 823 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 NPTXRO95502 500 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 PDGFRBP09619 1106 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 POU3F3P20264 500 aaPredicted RBP7.34□□□□□ -1.23
VRK1-205ENST00000555402 PAK1Q13153 545 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 FAM50AQ14320 339 aaKnown RBP7.34□□□□□ -1.23
VRK1-205ENST00000555402 SART3Q15020 963 aaKnown RBP7.34□□□□□ -1.23
VRK1-205ENST00000555402 KIZQ2M2Z5 673 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 POLNQ7Z5Q5 900 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 STRA8Q7Z7C7 330 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 AFAP1L2Q8N4X5 818 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 IL17DQ8TAD2 202 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 MTFR1LQ9H019 292 aa7.34□□□□□ -1.23
VRK1-205ENST00000555402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.34□□□□□ -1.23
VRK1-205ENST00000555402 H0Y858 1186 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 S100BP04271 92 aaPredicted RBP7.33□□□□□ -1.24
VRK1-205ENST00000555402 SCNN1BP51168 640 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 ZNF568Q3ZCX4 644 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 MAMDC4Q6UXC1 1216 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 LDLRAD3Q86YD5 345 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 IGSF22Q8N9C0 903 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 PIP4K2CQ8TBX8 421 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 CACTINQ8WUQ7 758 aaKnown RBP7.33□□□□□ -1.24
VRK1-205ENST00000555402 STAG1Q8WVM7 1258 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 USP7Q93009 1102 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 COQ6Q9Y2Z9 468 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 SLC30A1Q9Y6M5 507 aa7.33□□□□□ -1.24
VRK1-205ENST00000555402 ALG1L2C9J202 215 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 ARVCFO00192 962 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 PPFIA2O75334 1257 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 SOD2P04179 222 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 ENO2P09104 434 aaPredicted RBP7.32□□□□□ -1.24
VRK1-205ENST00000555402 FAHP16930 419 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 CR2P20023 1033 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 ST5P78524 1137 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 PFKPQ01813 784 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 SEPT7Q16181 437 aaKnown RBP7.32□□□□□ -1.24
VRK1-205ENST00000555402 PLEKHG6Q3KR16 790 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 PAN2Q504Q3 1202 aaKnown RBP7.32□□□□□ -1.24
VRK1-205ENST00000555402 ABHD17CQ6PCB6 329 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 RBM12BQ8IXT5 1001 aaKnown RBP7.32□□□□□ -1.24
VRK1-205ENST00000555402 OR2W6PQ8NHA6 318 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 ZG16BQ96DA0 208 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 FAM89AQ96GI7 184 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 JAM3Q9BX67 310 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 CARD11Q9BXL7 1154 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 TYW1Q9NV66 732 aaKnown RBP7.32□□□□□ -1.24
VRK1-205ENST00000555402 KLHL42Q9P2K6 505 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 OAZ3Q9UMX2 235 aa7.32□□□□□ -1.24
VRK1-205ENST00000555402 M0R2C6 588 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 GSTA4O15217 222 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 IL18BPO95998 194 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 KCNA6P17658 529 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 DNM2P50570 870 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 DHCR24Q15392 516 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 RNF151Q2KHN1 245 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 FAM47CQ5HY64 1035 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 FNDC7Q5VTL7 733 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 PCDH19Q8TAB3 1148 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 WDR66Q8TBY9 1149 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 TTC1Q99614 292 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 WDR26Q9H7D7 661 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 IPPKQ9H8X2 491 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 CABP5Q9NP86 173 aa7.31□□□□□ -1.24
VRK1-205ENST00000555402 FAM47E-STBD1D6RA91 191 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 MARCH6O60337 910 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 GLRX3O76003 335 aaKnown RBP7.3□□□□□ -1.24
VRK1-205ENST00000555402 GRK2P25098 689 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 ACRV1P26436 265 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 GRK3P35626 688 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 GUCY2FP51841 1108 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 HNRNPA0Q13151 305 aaKnown RBP7.3□□□□□ -1.24
VRK1-205ENST00000555402 NXPE1Q8N323 547 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 LARP4BQ92615 738 aaKnown RBP7.3□□□□□ -1.24
VRK1-205ENST00000555402 FBXW5Q969U6 566 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 CRAMP1Q96RY5 1269 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 KCNJ15Q99712 375 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 MMRN2Q9H8L6 949 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 G3BP2Q9UN86 482 aaKnown RBP7.3□□□□□ -1.24
VRK1-205ENST00000555402 ZKSCAN5Q9Y2L8 839 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 PCSK5Q92824 1860 aa7.3□□□□□ -1.24
VRK1-205ENST00000555402 CCDC66A2RUB6 948 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 BRINP1O60477 761 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 GAS7O60861 476 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 EYA4O95677 639 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 ADH4P08319 380 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 TUSC3Q13454 348 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 TUBA3CQ13748 450 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 BRDTQ58F21 947 aaPredicted RBP7.29□□□□□ -1.24
VRK1-205ENST00000555402 CD276Q5ZPR3 534 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 TUBA3EQ6PEY2 450 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 OR14A2Q96R54 314 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 TACO1Q9BSH4 297 aaKnown RBP7.29□□□□□ -1.24
VRK1-205ENST00000555402 PDGFDQ9GZP0 370 aaPredicted RBP7.29□□□□□ -1.24
VRK1-205ENST00000555402 IFT22Q9H7X7 185 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 CATSPERZQ9NTU4 200 aa7.29□□□□□ -1.24
VRK1-205ENST00000555402 PPARGC1AQ9UBK2 798 aaKnown RBP7.29□□□□□ -1.24
VRK1-205ENST00000555402 CDC14BO60729 498 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms