RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 EIF6P56537 245 aaKnown RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 DLX2Q07687 328 aaPredicted RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 TAF7Q15545 349 aaPredicted RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 ZYXQ15942 572 aaKnown RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 CCDC27Q2M243 656 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 SLC10A5Q5PT55 438 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 HHIPL2Q6UWX4 724 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 FERMT3Q86UX7 667 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 FIBCD1Q8N539 461 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 CELF1Q92879 486 aaKnown RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 PTCHD1Q96NR3 888 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 CRAMP1Q96RY5 1269 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 TM9SF2Q99805 663 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 TMPRSS5Q9H3S3 457 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 NOL6Q9H6R4 1146 aaKnown RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 ZNF408Q9H9D4 720 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 ADARB2Q9NS39 739 aaKnown RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 FAM86C1Q9NVL1 165 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 POLLQ9UGP5 575 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 CNOT7Q9UIV1 285 aaKnown RBP4.19□□□□□ -1.74
SLIRP-202ENST00000553981 FAN1Q9Y2M0 1017 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 ATP6V0A2Q9Y487 856 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 ZNF451Q9Y4E5 1061 aa4.19□□□□□ -1.74
SLIRP-202ENST00000553981 TBC1D8O95759 1140 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 CD3EP07766 207 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 GLI4P10075 376 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 IMPDH2P12268 514 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 PDIA4P13667 645 aaKnown RBP4.18□□□□□ -1.74
SLIRP-202ENST00000553981 INSRRP14616 1297 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 L1CAMP32004 1257 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 GPSM2P81274 684 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 POU4F1Q01851 419 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 KIF23Q02241 960 aaPredicted RBP4.18□□□□□ -1.74
SLIRP-202ENST00000553981 KIAA2012Q0VF49 1180 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 TBC1D10BQ4KMP7 808 aaPredicted RBP4.18□□□□□ -1.74
SLIRP-202ENST00000553981 PRAMEF18Q5VWM3 479 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 UNC5AQ6ZN44 842 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 NLRP10Q86W26 655 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 NIM1KQ8IY84 436 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 GIPC2Q8TF65 315 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 ALG3Q92685 438 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 BCL2L13Q9BXK5 485 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 DBNDD1Q9H9R9 158 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 USP40Q9NVE5 1235 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 RNF186Q9NXI6 227 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 DBR1Q9UK59 544 aaKnown RBP4.18□□□□□ -1.74
SLIRP-202ENST00000553981 CNOT11Q9UKZ1 510 aaKnown RBP4.18□□□□□ -1.74
SLIRP-202ENST00000553981 FZD1Q9UP38 647 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 SF3B6Q9Y3B4 125 aaKnown RBP4.18□□□□□ -1.74
SLIRP-202ENST00000553981 DUSP10Q9Y6W6 482 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 AOX1Q06278 1338 aa4.18□□□□□ -1.74
SLIRP-202ENST00000553981 IBTKQ9P2D0 1353 aaPredicted RBP4.17□□□□□ -1.74
SLIRP-202ENST00000553981 K7ESM1 405 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 NPHP1O15259 732 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 U2AF1L5P0DN76 240 aaPredicted RBP4.17□□□□□ -1.74
SLIRP-202ENST00000553981 ITGA4P13612 1032 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 EIF2S2P20042 333 aaKnown RBP4.17□□□□□ -1.74
SLIRP-202ENST00000553981 PMLP29590 882 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 ECE1P42892 770 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 U2AF1Q01081 240 aaKnown RBP eCLIP4.17□□□□□ -1.74
SLIRP-202ENST00000553981 PUM1Q14671 1186 aaKnown RBP eCLIP4.17□□□□□ -1.745e-7■■■□□ 19
SLIRP-202ENST00000553981 LDLRAD1Q5T700 205 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 RGMBQ6NW40 437 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 RUFY4Q6ZNE9 571 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 RASAL3Q86YV0 1011 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 CARFQ8N187 725 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 RBBP8NLQ8NC74 664 aaPredicted RBP4.17□□□□□ -1.74
SLIRP-202ENST00000553981 JDP2Q8WYK2 163 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 RBM17Q96I25 401 aaKnown RBP4.17□□□□□ -1.74
SLIRP-202ENST00000553981 ZDHHC15Q96MV8 337 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 FERD3LQ96RJ6 166 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 MXD3Q9BW11 206 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 BCAS3Q9H6U6 928 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 RXFP1Q9HBX9 757 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 ZNF652Q9Y2D9 606 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 PCDHAC2Q9Y5I4 1007 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 CLSPNQ9HAW4 1339 aa4.17□□□□□ -1.74
SLIRP-202ENST00000553981 CBFA2T2O43439 604 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 HTATSF1O43719 755 aaKnown RBP4.16□□□□□ -1.74
SLIRP-202ENST00000553981 NOBOXO60393 691 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 GUCY2CP25092 1073 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 CNR2P34972 360 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 HUNKP57058 714 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 AIMP1Q12904 312 aaKnown RBP4.16□□□□□ -1.74
SLIRP-202ENST00000553981 GRAPQ13588 217 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 RCSD1Q6JBY9 416 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 COPS6Q7L5N1 327 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 B3GNT8Q7Z7M8 397 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 TMEM87AQ8NBN3 555 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 RGS22Q8NE09 1264 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 GRAPLQ8TC17 118 aaPredicted RBP4.16□□□□□ -1.74
SLIRP-202ENST00000553981 DDX1Q92499 740 aaKnown RBP4.16□□□□□ -1.74
SLIRP-202ENST00000553981 RPGRQ92834 1020 aaKnown RBP4.16□□□□□ -1.74
SLIRP-202ENST00000553981 TSPAN17Q96FV3 270 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 FAM89AQ96GI7 184 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 GMLQ99445 158 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 MCMBPQ9BTE3 642 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 ISCA1Q9BUE6 129 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 UTP14AQ9BVJ6 771 aaKnown RBP4.16□□□□□ -1.74
SLIRP-202ENST00000553981 NYXQ9GZU5 481 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms