RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 FBXO15Q8NCQ5 510 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-223ENST00000553686 TMEM52Q8NDY8 209 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 ADCY4Q8NFM4 1077 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 INTS4Q96HW7 963 aaKnown RBP7.63□□□□□ -1.19
ATXN3-223ENST00000553686 ZDHHC15Q96MV8 337 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 KLHL25Q9H0H3 589 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 GBP3Q9H0R5 595 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 EPB41L4BQ9H329 900 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 ERVK13-1Q9NX77 482 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 ZMYND8Q9ULU4 1186 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-223ENST00000553686 CCL15-CCL14A0A0B4J2E2 113 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 SMAD7O15105 426 aaKnown RBP7.62□□□□□ -1.19
ATXN3-223ENST00000553686 UFL1O94874 794 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 EFEMP2O95967 443 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 PSMC4P43686 418 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 POU4F1Q01851 419 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 ARID5AQ03989 594 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-223ENST00000553686 CCL15Q16663 113 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 FCRL3Q96P31 734 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-223ENST00000553686 CDX2Q99626 313 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-223ENST00000553686 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATXN3-223ENST00000553686 ARHGAP39Q9C0H5 1083 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 PANK3Q9H999 370 aa7.62□□□□□ -1.19
ATXN3-223ENST00000553686 ZCCHC17Q9NP64 241 aaKnown RBP7.62□□□□□ -1.19
ATXN3-223ENST00000553686 RBBP6Q7Z6E9 1792 aaKnown RBP7.61□□□□□ -1.19
ATXN3-223ENST00000553686 U2SURPO15042 1029 aaKnown RBP7.61□□□□□ -1.19
ATXN3-223ENST00000553686 ETFBP38117 255 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 SF3B3Q15393 1217 aaKnown RBP7.61□□□□□ -1.19
ATXN3-223ENST00000553686 GALNT18Q6P9A2 607 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 IRF2BP1Q8IU81 584 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 NAT16Q8N8M0 369 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
ATXN3-223ENST00000553686 BRI3BPQ8WY22 251 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 CELF1Q92879 486 aaKnown RBP7.61□□□□□ -1.19
ATXN3-223ENST00000553686 OPTNQ96CV9 577 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 PAWRQ96IZ0 340 aaKnown RBP7.61□□□□□ -1.19
ATXN3-223ENST00000553686 PLCD4Q9BRC7 762 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 C1QTNF1Q9BXJ1 281 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 CRTAC1Q9NQ79 661 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 IGSF5Q9NSI5 407 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 FZD1Q9UP38 647 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 GPR55Q9Y2T6 319 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-223ENST00000553686 KNSTRNQ9Y448 316 aa7.61□□□□□ -1.19
ATXN3-223ENST00000553686 PIEZO1Q92508 2521 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 KIF20BQ96Q89 1820 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 A0A1W2PQ45 241 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-223ENST00000553686 A0A1W2PQY0 241 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 MYO1BO43795 1136 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 VAMP4O75379 141 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 SASH1O94885 1247 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 CD3EP07766 207 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 CETPP11597 493 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 PNLIPP16233 465 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 KIR3DS1Q14943 382 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 HSF5Q4G112 596 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-223ENST00000553686 STRIP1Q5VSL9 837 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 HLA-DQA1Q5Y7H0 255 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 NLRP10Q86W26 655 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 FAM43AQ8N2R8 423 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 KCNN1Q92952 543 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 APBA2Q99767 749 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 TINF2Q9BSI4 451 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 SUSD2Q9UGT4 822 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 SUGT1Q9Y2Z0 365 aa7.6□□□□□ -1.19
ATXN3-223ENST00000553686 MYPNQ86TC9 1320 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 SPTBN5Q9NRC6 3674 aaKnown RBP7.59□□□□□ -1.19
ATXN3-223ENST00000553686 ANKRD34BA5PLL1 514 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 HTATSF1O43719 755 aaKnown RBP7.59□□□□□ -1.19
ATXN3-223ENST00000553686 TMEM253P0C7T8 217 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 HSP90B1P14625 803 aaKnown RBP7.59□□□□□ -1.19
ATXN3-223ENST00000553686 IFNGR1P15260 489 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 SYN1P17600 705 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 DNAJA1P31689 397 aaKnown RBP7.59□□□□□ -1.19
ATXN3-223ENST00000553686 NCAPHQ15003 741 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 DLGAP5Q15398 846 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 ZNF605Q86T29 641 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 SLCO6A1Q86UG4 719 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 ARHGEF39Q8N4T4 335 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 BHLHE22Q8NFJ8 381 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-223ENST00000553686 RCC1LQ96I51 464 aaKnown RBP7.59□□□□□ -1.19
ATXN3-223ENST00000553686 DEFB118Q96PH6 123 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 ZNF552Q9H707 407 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-223ENST00000553686 PRKAG3Q9UGI9 489 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 TAF6LQ9Y6J9 622 aa7.59□□□□□ -1.19
ATXN3-223ENST00000553686 FGF10O15520 208 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-223ENST00000553686 FOSL2P15408 326 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 PRKCAP17252 672 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 DPY19L1Q2PZI1 675 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 TNNI3KQ59H18 835 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 DACT2Q5SW24 774 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 ADGRF1Q5T601 910 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 C17orf99Q6UX52 265 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 MCM10Q7L590 875 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 JAMLQ86YT9 394 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 SLC43A3Q8NBI5 491 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 JMJD8Q96S16 334 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 PPP1R16BQ96T49 567 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 ACTR10Q9NZ32 417 aa7.58□□□□□ -1.2
ATXN3-223ENST00000553686 COL1A1P02452 1464 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms