RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 ARSHQ5FYA8 562 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 DCAF15Q66K64 600 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 CYP26C1Q6V0L0 522 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 KRT26Q7Z3Y9 468 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 ZBTB33Q86T24 672 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 ALYREFQ86V81 257 aaKnown RBP6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 LDHDQ86WU2 507 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 MYOCDQ8IZQ8 938 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 SPICE1Q8N0Z3 855 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 OR8K1Q8NGG5 319 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 TBC1D5Q92609 795 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 GTPBP3Q969Y2 492 aaKnown RBP6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 CEP63Q96MT8 703 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 DNAJC7Q99615 494 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 TTYH3Q9C0H2 523 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 ABHD10Q9NUJ1 306 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 PANK4Q9NVE7 773 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 TAB2Q9NYJ8 693 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 CNOT7Q9UIV1 285 aaKnown RBP6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 PTPRFP10586 1907 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 ZNF536O15090 1300 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 RPTORQ8N122 1335 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 TTC26A0AVF1 554 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 RASSF10A6NK89 507 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 C19orf81C9J6K1 198 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 E9PMD0 336 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 SLITRK3O94933 977 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 CCDC175P0C221 793 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 INPP5BP32019 993 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 KRT9P35527 623 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 ZNF76P36508 570 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 GMPSP49915 693 aaPredicted RBP6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 SETQ01105 290 aaPredicted RBP6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 GOLGA8FQ08AF8 430 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 GOLGA8DPQ0D2H9 430 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 TBC1D8BQ0IIM8 1120 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 TUBB2AQ13885 445 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 EPHA7Q15375 998 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 MEA1Q16626 185 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 NFIL3Q16649 462 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 MAN2A1Q16706 1144 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 PTPN21Q16825 1174 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 EDRF1Q3B7T1 1238 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 FAM26FQ5R3K3 315 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 RAD9BQ6WBX8 426 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 RIPOR1Q6ZS17 1223 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 LRRC55Q6ZSA7 311 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 EPM2AIP1Q7L775 607 aaPredicted RBP6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 DYMQ7RTS9 669 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 CCDC84Q86UT8 332 aaPredicted RBP6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 MCF2L2Q86YR7 1114 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 CLEC4DQ8WXI8 215 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 ANKRD7Q92527 254 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 CNOT6LQ96LI5 555 aaKnown RBP6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 C12orf42Q96LP6 360 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 RIT2Q99578 217 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 TSG101Q99816 390 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 SLF1Q9BQI6 1058 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 MXRA8Q9BRK3 442 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 TUBB2BQ9BVA1 445 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 NOC4LQ9BVI4 516 aaKnown RBP6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 ZNF341Q9BYN7 854 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 GLIS2Q9BZE0 524 aaPredicted RBP6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 WDR11Q9BZH6 1224 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 KCTD10Q9H3F6 313 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 SLC38A10Q9HBR0 1119 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 KCND2Q9NZV8 630 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 MYO1AQ9UBC5 1043 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 ADAMTS5Q9UNA0 930 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 TRAF3IP3Q9Y228 551 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 LUC7L2Q9Y383 392 aaKnown RBP6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 PPP2R3BQ9Y5P8 575 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 FRMPD4Q14CM0 1322 aa6.66□□□□□ -1.34
VIPAS39-204ENST00000553576 SHTN1A0MZ66 631 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 EML1O00423 815 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 RRP9O43818 475 aaKnown RBP6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 COBLO75128 1261 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 EGFRP00533 1210 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 CFBP00751 764 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 IDEP14735 1019 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 GAP43P17677 238 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 MX2P20592 715 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 HOXA13P31271 388 aaPredicted RBP6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 MTIF2P46199 727 aaKnown RBP6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 RNF144AP50876 292 aaPredicted RBP6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 PRELPP51888 382 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 BACE1P56817 501 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 PSMC6P62333 389 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 ERVK-24P63145 666 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 ZBED6P86452 979 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 BMT2Q1RMZ1 405 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 VWA3BQ502W6 1294 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 RINT1Q6NUQ1 792 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 XRRA1Q6P2D8 792 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 WDR59Q6PJI9 974 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 SYT10Q6XYQ8 523 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 TOGARAM2Q6ZUX3 1019 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 C1orf186Q6ZWK4 172 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 GPBP1Q86WP2 473 aa6.65□□□□□ -1.34
VIPAS39-204ENST00000553576 APOBEC3FQ8IUX4 373 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms