RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 WWC2Q6AWC2 1192 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 RAD9BQ6WBX8 426 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 NOP9Q86U38 636 aaKnown RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 CERS3Q8IU89 383 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 WFDC8Q8IUA0 241 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 BLIDQ8IZY5 108 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 SRBD1Q8N5C6 995 aaKnown RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 C4orf32Q8N8J7 132 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 MSANTD4Q8NCY6 345 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 SLC7A3Q8WY07 619 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 CCDC47Q96A33 483 aaKnown RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 NSUN4Q96CB9 384 aaKnown RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 SHISA4Q96DD7 197 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 IQCDQ96DY2 449 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 FAM84BQ96KN1 310 aaPredicted RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 NUP58Q9BVL2 599 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 CCSER1Q9C0I3 900 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 CUEDC2Q9H467 287 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 THAP9Q9H5L6 903 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 MRPL44Q9H9J2 332 aaKnown RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 OSGEPQ9NPF4 335 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 TCP11L1Q9NUJ3 509 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 PSD3Q9NYI0 1048 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 MINPP1Q9UNW1 487 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 SLIT2O94813 1529 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 CNTNAP5Q8WYK1 1306 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 RREB1Q92766 1687 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 MYH6P13533 1939 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 KCNJ18B7U540 433 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 MAP2K7O14733 419 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 TLR3O15455 904 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 PRDM1O75626 825 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 TRIM37O94972 964 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 ADAMTS2O95450 1211 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 TBC1D8O95759 1140 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 ALBP02768 609 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 RPN1P04843 607 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 GYPCP04921 128 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 GSTP1P09211 210 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 MCM3P25205 808 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 EEF1GP26641 437 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 CASP14P31944 242 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 PRPHP41219 470 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 CRKP46108 304 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 STX17P56962 302 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 RPS8P62241 208 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 DYNLL1P63167 89 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 C19orf57Q0VDD7 668 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 ORC2Q13416 577 aaPredicted RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 ITPK1Q13572 414 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 KCNJ12Q14500 433 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 SMC1AQ14683 1233 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 KARSQ15046 597 aaKnown RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 KRT31Q15323 416 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 GRIK5Q16478 980 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 HSP90AA4PQ58FG1 418 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 RNFT1Q5M7Z0 435 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 C20orf204Q6ZNR8 217 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 HDXQ7Z353 690 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 ADSSL1Q8N142 457 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 TXLNBQ8N3L3 684 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 DAGLBQ8NCG7 672 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 CCDC148Q8NFR7 591 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 OR8K1Q8NGG5 319 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 STK35Q8TDR2 534 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 NELFBQ8WX92 580 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 DHTKD1Q96HY7 919 aaPredicted RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 NAPGQ99747 312 aaPredicted RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 CORO1BQ9BR76 489 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 DESI2Q9BSY9 194 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 FUT8Q9BYC5 575 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 NYXQ9GZU5 481 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 OSBPL2Q9H1P3 480 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 HAUS4Q9H6D7 363 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 KAT14Q9H8E8 782 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 DCP1AQ9NPI6 582 aaPredicted RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 MAGEC2Q9UBF1 373 aaPredicted RBP6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 PCDHA4Q9UN74 947 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 CTNND2Q9UQB3 1225 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 STARD13Q9Y3M8 1113 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 XDHP47989 1333 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 PLCH1Q4KWH8 1693 aa6.68□□□□□ -1.34
CHMP4A-210ENST00000552620 LAMB2P55268 1798 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 DLEC1Q9Y238 1755 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 DUOX1Q9NRD9 1551 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 CCDC194A0A1B0GVG4 234 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 BICDL2A1A5D9 508 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 FAM221AA4D161 298 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 CTAGE15A4D2H0 777 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 FAM181BA6NEQ2 426 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 TSPY2A6NKD2 308 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 LGALS16A8MUM7 142 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 LINC01387J3KSC0 135 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 M0R082 166 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 CILPO75339 1184 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 EIF3JO75822 258 aaKnown RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 PARP1P09874 1014 aaKnown RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 CTAGE8P0CG41 777 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms