RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 SESN3P58005 492 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 ALDH6A1Q02252 535 aaKnown RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 DLX2Q07687 328 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 KIAA2012Q0VF49 1180 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 STILQ15468 1287 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 ESRP1Q6NXG1 681 aaKnown RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 DPP8Q6V1X1 898 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 CXXC5Q7LFL8 322 aaKnown RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 NECAB2Q7Z6G3 386 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 SPATS2Q86XZ4 545 aaKnown RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 SAMD11Q96NU1 681 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 BTBD2Q9BX70 525 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 AMNQ9BXJ7 453 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 SLC39A2Q9NP94 309 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 KCND1Q9NSA2 647 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 SPATA6Q9NWH7 488 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 ARHGAP20Q9P2F6 1191 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 ZNF536O15090 1300 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 hCG_2014768A0A024R1R8 64 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 PRAMEF22A3QJZ6 481 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 ALG1L2C9J202 215 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 K7ESF4 209 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 MATN3O15232 486 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 SUV39H1O43463 412 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 IL18BPO95998 194 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 RPL13P26373 211 aaKnown RBP4.83□□□□□ -1.64
SCAF11-215ENST00000551391 MC4RP32245 332 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 ECE1P42892 770 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 IGBP1P78318 339 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 DDB1Q16531 1140 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 TTC38Q5R3I4 469 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 BROXQ5VW32 411 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 PRAMEF18Q5VWM3 479 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 LHFPL2Q6ZUX7 228 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 STK32CQ86UX6 486 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 FAM124AQ86V42 546 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 ZNF761Q86XN6 746 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-215ENST00000551391 PHYKPLQ8IUZ5 450 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 PRPF38AQ8NAV1 312 aaKnown RBP4.83□□□□□ -1.64
SCAF11-215ENST00000551391 HIPK4Q8NE63 616 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 CALML6Q8TD86 181 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 MAML3Q96JK9 1138 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 C8orf49Q96NF6 230 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 RBM15Q96T37 977 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCAF11-215ENST00000551391 ZDHHC5Q9C0B5 715 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 PUS7LQ9H0K6 701 aaKnown RBP4.83□□□□□ -1.64
SCAF11-215ENST00000551391 UCKL1Q9NWZ5 548 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 ZFP69BQ9UJL9 534 aa4.83□□□□□ -1.64
SCAF11-215ENST00000551391 UBA6A0AVT1 1052 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-215ENST00000551391 PLATP00750 562 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 PRLP01236 227 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 CDKN1CP49918 316 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-215ENST00000551391 ANAPC15P60006 121 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 ROM1Q03395 351 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 SMAD4Q13485 552 aaKnown RBP4.82□□□□□ -1.64
SCAF11-215ENST00000551391 BORAQ6PGQ7 559 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 FRMD7Q6ZUT3 714 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 RPUSD2Q8IZ73 545 aaKnown RBP4.82□□□□□ -1.64
SCAF11-215ENST00000551391 LGI4Q8N135 537 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 TTC9BQ8N6N2 239 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 SLC16A11Q8NCK7 471 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 ADAMTS17Q8TE56 1095 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 OR10A5Q9H207 317 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 TYW1Q9NV66 732 aaKnown RBP4.82□□□□□ -1.64
SCAF11-215ENST00000551391 SLC5A4Q9NY91 659 aa4.82□□□□□ -1.64
SCAF11-215ENST00000551391 C1QTNF3-AMACRE9PGA6 284 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 FBXO21O94952 628 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 KNG1P01042 644 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 COL6A1P12109 1028 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 ZNF20P17024 532 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 ZNF28P17035 718 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 IL13P35225 146 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 MLLT6P55198 1093 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-215ENST00000551391 TMPRSS15P98073 1019 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 MOGSQ13724 837 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 RGL3Q3MIN7 710 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 KANK2Q63ZY3 851 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 IQSEC1Q6DN90 963 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 TIGD7Q6NT04 549 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-215ENST00000551391 GLB1LQ6UWU2 654 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 KANSL1Q7Z3B3 1105 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 CLRN3Q8NCR9 226 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 RTF1Q92541 710 aaKnown RBP4.81□□□□□ -1.64
SCAF11-215ENST00000551391 ZNF496Q96IT1 587 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-215ENST00000551391 TACO1Q9BSH4 297 aaKnown RBP4.81□□□□□ -1.64
SCAF11-215ENST00000551391 MENTQ9BUN1 341 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 WNT8AQ9H1J5 351 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 CROTQ9UKG9 612 aa4.81□□□□□ -1.64
SCAF11-215ENST00000551391 RAB11FIP3O75154 756 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 APEX1P27695 318 aaKnown RBP4.8□□□□□ -1.64
SCAF11-215ENST00000551391 GDF5P43026 501 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 GLRBP48167 497 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 IL13RA1P78552 427 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 SLC6A3Q01959 620 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 TBC1D10BQ4KMP7 808 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-215ENST00000551391 SLFN12LQ6IEE8 588 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 ESPNLQ6ZVH7 1005 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 ANKRD13AQ8IZ07 590 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 STPG3Q8N7X2 389 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms