RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 ICAM4Q14773 271 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 TTF1Q15361 905 aaPredicted RBP5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 SMAD2Q15796 467 aaKnown RBP5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 RGL3Q3MIN7 710 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 GPR158Q5T848 1215 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 SYDE2Q5VT97 1194 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 BROXQ5VW32 411 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 BTBD8Q5XKL5 378 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 CLRN3Q8NCR9 226 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 ARRDC4Q8NCT1 418 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 SMARCC2Q8TAQ2 1214 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 JDP2Q8WYK2 163 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 TSPAN17Q96FV3 270 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 KLC2Q9H0B6 622 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 CCDC8Q9H0W5 538 aaPredicted RBP5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 VTA1Q9NP79 307 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 RIC8BQ9NVN3 520 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 DBR1Q9UK59 544 aaKnown RBP5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 TRHDEQ9UKU6 1024 aa5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 G3BP2Q9UN86 482 aaKnown RBP5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 THRAP3Q9Y2W1 955 aaKnown RBP5.19□□□□□ -1.58
TSPAN8-205ENST00000550818 GABRDO14764 452 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 MARCH6O60337 910 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 PARNO95453 639 aaKnown RBP5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 PTX3P26022 381 aaPredicted RBP5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 LSP1P33241 339 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 FNTBP49356 437 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 ERVK-21P61565 698 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 TMEM132BQ14DG7 1078 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 TERF2Q15554 542 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 GLB1LQ6UWU2 654 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 RASSF3Q86WH2 238 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 LGI4Q8N135 537 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 ZNF610Q8N9Z0 462 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 ALG3Q92685 438 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 ZMAT4Q9H898 229 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 CD248Q9HCU0 757 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 TOMM22Q9NS69 142 aa5.18□□□□□ -1.58
TSPAN8-205ENST00000550818 PRAMEF25A6NGN4 478 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 ACOT7O00154 380 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 FOXP2O15409 715 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 NEK2P51955 445 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 EPHB1P54762 984 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 GRIN1Q05586 938 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 MCL1Q07820 350 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 LRRC32Q14392 662 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 EPHA7Q15375 998 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 PAN2Q504Q3 1202 aaKnown RBP5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 CATSPEREQ5SY80 951 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 ESRP1Q6NXG1 681 aaKnown RBP5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 TTLL7Q6ZT98 887 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 ZZZ3Q8IYH5 903 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 LINC00482Q8N8I6 264 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 CPA5Q8WXQ8 436 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 ZBTB8AQ96BR9 441 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 AHCYL2Q96HN2 611 aaKnown RBP5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 C16orf92Q96LL3 132 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 SMAD5Q99717 465 aaKnown RBP5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 DTLQ9NZJ0 730 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 SPEF1Q9Y4P9 236 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 EID1Q9Y6B2 187 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 ZNF536O15090 1300 aa5.17□□□□□ -1.58
TSPAN8-205ENST00000550818 RASSF10A6NK89 507 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 FBXO21O94952 628 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 FAHP16930 419 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 CD40P25942 277 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 HERVK_113P62684 666 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 KIAA2012Q0VF49 1180 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 SMAD4Q13485 552 aaKnown RBP5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 INAVAQ3KP66 663 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 ZNF575Q86XF7 245 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 MIB1Q86YT6 1006 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 FAM126BQ8IXS8 530 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 CBARPQ8N350 705 aaPredicted RBP5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 YIPF4Q9BSR8 244 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 ZDHHC5Q9C0B5 715 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 CHPF2Q9P2E5 772 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 C11orf21Q9P2W6 132 aa5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 NOC2LQ9Y3T9 749 aaKnown RBP5.16□□□□□ -1.58
TSPAN8-205ENST00000550818 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 KLF1Q13351 362 aaPredicted RBP5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 FRMD7Q6ZUT3 714 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 NME9Q86XW9 330 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 RAVER1Q8IY67 606 aaKnown RBP5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 ASB15Q8WXK1 588 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 CHMP4CQ96CF2 233 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 CDK5RAP1Q96SZ6 601 aaKnown RBP5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 MS4A5Q9H3V2 200 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 TOPORSQ9NS56 1045 aaPredicted RBP5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 C14orf119Q9NWQ9 140 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 HSPBP1Q9NZL4 362 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 PPP4R1LQ9P1A2 415 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 USP36Q9P275 1121 aaKnown RBP5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 TNKSO95271 1327 aa5.15□□□□□ -1.59
TSPAN8-205ENST00000550818 SHTN1A0MZ66 631 aa5.14□□□□□ -1.59
TSPAN8-205ENST00000550818 LRG1P02750 347 aa5.14□□□□□ -1.59
TSPAN8-205ENST00000550818 MMEP08473 750 aa5.14□□□□□ -1.59
TSPAN8-205ENST00000550818 AOAHP28039 575 aa5.14□□□□□ -1.59
TSPAN8-205ENST00000550818 IARSP41252 1262 aaKnown RBP5.14□□□□□ -1.59
TSPAN8-205ENST00000550818 CACNB2Q08289 660 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms