RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 FBXW5Q969U6 566 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 GMLQ99445 158 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 SPATA9Q9BWV2 254 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 BTBD2Q9BX70 525 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 OR10A2Q9H208 303 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 MMRN2Q9H8L6 949 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 AGO3Q9H9G7 860 aaKnown RBP4.19□□□□□ -1.74
CCNT1-203ENST00000550457 CEP72Q9P209 647 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 ABCA5Q8WWZ7 1642 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 EFCAB5A4FU69 1503 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 KDM5BQ9UGL1 1544 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 FGD6Q6ZV73 1430 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 CUX1P39880 1505 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 ZMYM4Q5VZL5 1548 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 PRAMEF25A6NGN4 478 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 AQP7O14520 342 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 MMEP08473 750 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 SRGAP2CP0DJJ0 459 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 HIBADHP31937 336 aaKnown RBP4.18□□□□□ -1.74
CCNT1-203ENST00000550457 GJA4P35212 333 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 RANGAP1P46060 587 aaPredicted RBP4.18□□□□□ -1.74
CCNT1-203ENST00000550457 INHBCP55103 352 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 HERVK_113P62684 666 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 PURAQ00577 322 aaKnown RBP4.18□□□□□ -1.74
CCNT1-203ENST00000550457 TUBA3CQ13748 450 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 RAB33AQ14088 237 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 FAM209AQ5JX71 171 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 SPTY2D1Q68D10 685 aaPredicted RBP4.18□□□□□ -1.74
CCNT1-203ENST00000550457 TUBA3EQ6PEY2 450 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 C16orf59Q7L2K0 433 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 DPH6Q7L8W6 267 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 ZNF627Q7L945 461 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 MAMDC2Q7Z304 686 aaPredicted RBP4.18□□□□□ -1.74
CCNT1-203ENST00000550457 FAM9BQ8IZU0 186 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 PTPRN2Q92932 1015 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 FBXO10Q9UK96 956 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 CFAP43Q8NDM7 1665 aa4.18□□□□□ -1.74
CCNT1-203ENST00000550457 BRD4O60885 1362 aaPredicted RBP4.17□□□□□ -1.74
CCNT1-203ENST00000550457 A0A087X1B8 175 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 A0A0G2JNJ9 132 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 ECE1P42892 770 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 RRP1P56182 461 aaKnown RBP4.17□□□□□ -1.74
CCNT1-203ENST00000550457 GUCY1A3Q02108 690 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 GRM7Q14831 915 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 RALBP1Q15311 655 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 TMEM200BQ69YZ2 307 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 PCSK4Q6UW60 755 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 Q6ZPA2 131 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 OTOP2Q7RTS6 562 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 ZNF575Q86XF7 245 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 SCUBE1Q8IWY4 988 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 ZNF669Q96BR6 464 aaPredicted RBP4.17□□□□□ -1.74
CCNT1-203ENST00000550457 TMEM176AQ96HP8 235 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 HIRIP3Q9BW71 556 aaPredicted RBP4.17□□□□□ -1.74
CCNT1-203ENST00000550457 OR10A5Q9H207 317 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 ZNF703Q9H7S9 590 aaPredicted RBP4.17□□□□□ -1.74
CCNT1-203ENST00000550457 MSL2Q9HCI7 577 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 UCKL1Q9NWZ5 548 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 Q9UFV3 132 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 ISY1Q9ULR0 285 aaKnown RBP4.17□□□□□ -1.74
CCNT1-203ENST00000550457 MSRB2Q9Y3D2 182 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 PCDHA9Q9Y5H5 950 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 NAIPQ13075 1403 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 SPATA31E1Q6ZUB1 1445 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 FGD5Q6ZNL6 1462 aa4.17□□□□□ -1.74
CCNT1-203ENST00000550457 TRBV23-1A0A0A0MS06 115 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 CCDC66A2RUB6 948 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 SLC26A4O43511 780 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 CLASP2O75122 1294 aaKnown RBP4.16□□□□□ -1.74
CCNT1-203ENST00000550457 KRT4P19013 534 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 STAT5BP51692 787 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 NANOS3P60323 173 aaKnown RBP4.16□□□□□ -1.74
CCNT1-203ENST00000550457 LACTBP83111 547 aaPredicted RBP4.16□□□□□ -1.74
CCNT1-203ENST00000550457 MOGSQ13724 837 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 SGMS1Q86VZ5 419 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 RTKN2Q8IZC4 609 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 BCL6BQ8N143 479 aaPredicted RBP4.16□□□□□ -1.74
CCNT1-203ENST00000550457 SLC43A3Q8NBI5 491 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 PNISRQ8TF01 805 aaKnown RBP4.16□□□□□ -1.74
CCNT1-203ENST00000550457 ZNF483Q8TF39 744 aaPredicted RBP4.16□□□□□ -1.74
CCNT1-203ENST00000550457 ASB15Q8WXK1 588 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 FRAT1Q92837 279 aaPredicted RBP4.16□□□□□ -1.74
CCNT1-203ENST00000550457 AGAP2Q99490 1192 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 NELFAQ9H3P2 528 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 PFDN2Q9UHV9 154 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 LAS1LQ9Y4W2 734 aaKnown RBP4.16□□□□□ -1.74
CCNT1-203ENST00000550457 PTPN23Q9H3S7 1636 aa4.16□□□□□ -1.74
CCNT1-203ENST00000550457 LRPPRCP42704 1394 aaKnown RBP4.15□□□□□ -1.74
CCNT1-203ENST00000550457 CARMIL1Q5VZK9 1371 aa4.15□□□□□ -1.74
CCNT1-203ENST00000550457 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.75
CCNT1-203ENST00000550457 RASSF10A6NK89 507 aa4.15□□□□□ -1.75
CCNT1-203ENST00000550457 DIAPH1O60610 1272 aaKnown RBP4.15□□□□□ -1.75
CCNT1-203ENST00000550457 ADH4P08319 380 aa4.15□□□□□ -1.75
CCNT1-203ENST00000550457 MEOX1P50221 254 aa4.15□□□□□ -1.75
CCNT1-203ENST00000550457 DNM2P50570 870 aa4.15□□□□□ -1.75
CCNT1-203ENST00000550457 SUMO1P63165 101 aaKnown RBP4.15□□□□□ -1.75
CCNT1-203ENST00000550457 SAFB2Q14151 953 aaKnown RBP eCLIP4.15□□□□□ -1.75
CCNT1-203ENST00000550457 BECN1Q14457 450 aa4.15□□□□□ -1.75
CCNT1-203ENST00000550457 CRY1Q16526 586 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms