RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ZNF710Q8N1W2 664 aa15.4■□□□□ 0.06
TROAP-211ENST00000549891 METTL13Q8N6R0 699 aa15.4■□□□□ 0.06
TROAP-211ENST00000549891 TMEM40Q8WWA1 233 aa15.4■□□□□ 0.06
TROAP-211ENST00000549891 TCEANC2Q96MN5 208 aa15.4■□□□□ 0.06
TROAP-211ENST00000549891 OSMRQ99650 979 aa15.4■□□□□ 0.06
TROAP-211ENST00000549891 CDHR5Q9HBB8 845 aa15.4■□□□□ 0.06
TROAP-211ENST00000549891 C6orf50Q9HD87 102 aa15.4■□□□□ 0.06
TROAP-211ENST00000549891 PUF60Q9UHX1 559 aaKnown RBP15.4■□□□□ 0.06
TROAP-211ENST00000549891 NAP1L2Q9ULW6 460 aaPredicted RBP15.4■□□□□ 0.06
TROAP-211ENST00000549891 BARX2Q9UMQ3 279 aaPredicted RBP15.4■□□□□ 0.06
TROAP-211ENST00000549891 MAFBQ9Y5Q3 323 aaPredicted RBP15.4■□□□□ 0.06
TROAP-211ENST00000549891 TECTAO75443 2155 aa15.4■□□□□ 0.06
TROAP-211ENST00000549891 ZBTB42B2RXF5 422 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 LOC730098B7Z3J9 87 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 MAGEB2O15479 319 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 C22orf31O95567 290 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 GLP2RO95838 553 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 TMOD1P28289 359 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 GNA11P29992 359 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 MRE11P49959 708 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 METAP2P50579 478 aaKnown RBP eCLIP15.39■□□□□ 0.05
TROAP-211ENST00000549891 FAM102BQ5T8I3 360 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 BMP8AQ7Z5Y6 402 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 REXO1Q8N1G1 1221 aaKnown RBP15.39■□□□□ 0.05
TROAP-211ENST00000549891 COLGALT1Q8NBJ5 622 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 CRYGNQ8WXF5 182 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 FAM167AQ96KS9 214 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 PHF7Q9BWX1 381 aaPredicted RBP15.39■□□□□ 0.05
TROAP-211ENST00000549891 ZMYND12Q9H0C1 365 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
TROAP-211ENST00000549891 LZTS1Q9Y250 596 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 USP15Q9Y4E8 981 aaPredicted RBP15.39■□□□□ 0.05
TROAP-211ENST00000549891 PCDHA10Q9Y5I2 948 aa15.39■□□□□ 0.05
TROAP-211ENST00000549891 ATF7P17544 494 aaPredicted RBP15.38■□□□□ 0.05
TROAP-211ENST00000549891 ATP4AP20648 1035 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 CDC27P30260 824 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 CBX2Q14781 532 aaPredicted RBP15.38■□□□□ 0.05
TROAP-211ENST00000549891 DUSP6Q16828 381 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 ADCK5Q3MIX3 580 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 TRIM67Q6ZTA4 783 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 FAM228AQ86W67 206 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 MAP7D2Q96T17 732 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 PRRX2Q99811 253 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 TMEM117Q9H0C3 514 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 FAM217BQ9NTX9 383 aaPredicted RBP15.38■□□□□ 0.05
TROAP-211ENST00000549891 SAMM50Q9Y512 469 aa15.38■□□□□ 0.05
TROAP-211ENST00000549891 PER2O15055 1255 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 GPR32O75388 356 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 VTNP04004 478 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 FGFR1P11362 822 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 ZSCAN20P17040 1043 aaPredicted RBP15.37■□□□□ 0.05
TROAP-211ENST00000549891 PPM1AP35813 382 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 FAM189BP81408 668 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 AKAP17AQ02040 695 aaKnown RBP15.37■□□□□ 0.05
TROAP-211ENST00000549891 SUGP1Q8IWZ8 645 aaKnown RBP15.37■□□□□ 0.05
TROAP-211ENST00000549891 ABI1Q8IZP0 508 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 BICD2Q8TD16 824 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 MRPS27Q92552 414 aaKnown RBP15.37■□□□□ 0.05
TROAP-211ENST00000549891 PBXIP1Q96AQ6 731 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 PPP1R16BQ96T49 567 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 AKT3Q9Y243 479 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 PCDHGC5Q9Y5F6 944 aa15.37■□□□□ 0.05
TROAP-211ENST00000549891 TMEM221A6NGB7 291 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 WDR64B1ANS9 1081 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 M0R296 226 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 ADD1P35611 737 aaKnown RBP15.36■□□□□ 0.05
TROAP-211ENST00000549891 NLRP11P59045 1033 aaKnown RBP15.36■□□□□ 0.05
TROAP-211ENST00000549891 ERVFC1P60507 584 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 ZXDAP98168 799 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 PLCB3Q01970 1234 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 KRT17Q04695 432 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 PRR16Q569H4 304 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 EFCAB12Q6NXP0 572 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 TMEM184AQ6ZMB5 413 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 TRMT1LQ7Z2T5 733 aaKnown RBP15.36■□□□□ 0.05
TROAP-211ENST00000549891 RASEFQ8IZ41 740 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 LRRC43Q8N309 656 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 RASGRP4Q8TDF6 673 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 RPGRIP1Q96KN7 1286 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 CWH43Q9H720 699 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 NGRNQ9NPE2 291 aaKnown RBP15.36■□□□□ 0.05
TROAP-211ENST00000549891 ENTPD7Q9NQZ7 604 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 NRBP2Q9NSY0 501 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 GABBR1Q9UBS5 961 aa15.36■□□□□ 0.05
TROAP-211ENST00000549891 FSCN2O14926 492 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 PRPF3O43395 683 aaKnown RBP15.35■□□□□ 0.05
TROAP-211ENST00000549891 CIITAP33076 1130 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 CLCN3P51790 818 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 DSC3Q14574 896 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 PLPP4Q5VZY2 271 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 CCDC148Q8NFR7 591 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 SUSD6Q92537 303 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 ZNF558Q96NG5 402 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 TCF25Q9BQ70 676 aa15.35■□□□□ 0.05
TROAP-211ENST00000549891 CDC45O75419 566 aa15.34■□□□□ 0.05
TROAP-211ENST00000549891 EIF4BP23588 611 aaKnown RBP15.34■□□□□ 0.05
TROAP-211ENST00000549891 TECP42680 631 aa15.34■□□□□ 0.05
TROAP-211ENST00000549891 PTPN5P54829 565 aa15.34■□□□□ 0.05
TROAP-211ENST00000549891 SIGLEC14Q08ET2 396 aa15.34■□□□□ 0.05
TROAP-211ENST00000549891 APOBRQ0VD83 1088 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms