RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 TRIM50Q86XT4 487 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 DAW1Q8N136 415 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 CSGALNACT2Q8N6G5 542 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 PPTC7Q8NI37 304 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 NOC3LQ8WTT2 800 aaKnown RBP13.35□□□□□ -0.27
PTPRR-209ENST00000549308 AFG1LQ8WV93 481 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 SCFD1Q8WVM8 642 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 DUSP9Q99956 384 aaKnown RBP13.35□□□□□ -0.27
PTPRR-209ENST00000549308 SRRTQ9BXP5 876 aaKnown RBP13.35□□□□□ -0.27
PTPRR-209ENST00000549308 NIFKQ9BYG3 293 aaKnown RBP13.35□□□□□ -0.27
PTPRR-209ENST00000549308 LARSQ9P2J5 1176 aaKnown RBP13.35□□□□□ -0.27
PTPRR-209ENST00000549308 GABRQQ9UN88 632 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 MYH11P35749 1972 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 PRPF6O94906 941 aaKnown RBP13.34□□□□□ -0.27
PTPRR-209ENST00000549308 ZNF865P0CJ78 1059 aaPredicted RBP13.34□□□□□ -0.27
PTPRR-209ENST00000549308 PLS3P13797 630 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 UBASH3AP57075 661 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 LRRC63Q05C16 580 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 SPAG1Q07617 926 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 EPM2AIP1Q7L775 607 aaPredicted RBP13.34□□□□□ -0.27
PTPRR-209ENST00000549308 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 DRC7Q8IY82 874 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 MCPH1Q8NEM0 835 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 ANKRD20A12PQ8NF67 263 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
PTPRR-209ENST00000549308 KIFAP3Q92845 792 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 CFHR5Q9BXR6 569 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 THAP9Q9H5L6 903 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 GPRC5CQ9NQ84 441 aa13.34□□□□□ -0.27
PTPRR-209ENST00000549308 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
PTPRR-209ENST00000549308 K7ENM7 598 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 EIF3DO15371 548 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPRR-209ENST00000549308 FGFR1OPO95684 399 aaKnown RBP13.33□□□□□ -0.28
PTPRR-209ENST00000549308 LGALS2P05162 132 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 PTMAP06454 111 aaKnown RBP13.33□□□□□ -0.28
PTPRR-209ENST00000549308 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.28
PTPRR-209ENST00000549308 XRCC5P13010 732 aaKnown RBP13.33□□□□□ -0.28
PTPRR-209ENST00000549308 CDC25BP30305 580 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 RFC5P40937 340 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 FLT3LGP49771 235 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 SLC26A2P50443 739 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 PRKCZQ05513 592 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 EMC2Q15006 297 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 PLCB4Q15147 1175 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.33□□□□□ -0.28
PTPRR-209ENST00000549308 FAM114A1Q8IWE2 563 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 ATP8B4Q8TF62 1192 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 MRFAP1L1Q96HT8 127 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 XPO4Q9C0E2 1151 aaKnown RBP13.33□□□□□ -0.28
PTPRR-209ENST00000549308 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 UBE4BO95155 1302 aa13.33□□□□□ -0.28
PTPRR-209ENST00000549308 KCNJ18B7U540 433 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 DYNC1LI2O43237 492 aaPredicted RBP13.32□□□□□ -0.28
PTPRR-209ENST00000549308 PEX3P56589 373 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 KCNJ12Q14500 433 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 KNOP1Q1ED39 458 aaKnown RBP13.32□□□□□ -0.28
PTPRR-209ENST00000549308 BMT2Q1RMZ1 405 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 ZNF720Q7Z2F6 126 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 SPC24Q8NBT2 197 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 CD99L2Q8TCZ2 262 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 SLC7A3Q8WY07 619 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 POLR3FQ9H1D9 316 aaPredicted RBP13.32□□□□□ -0.28
PTPRR-209ENST00000549308 XPNPEP1Q9NQW7 623 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 PPME1Q9Y570 386 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 PCDHB13Q9Y5F0 798 aa13.32□□□□□ -0.28
PTPRR-209ENST00000549308 CCDC169A6NNP5 214 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 ADCY6O43306 1168 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 CALUO43852 315 aaPredicted RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 HBP1O60381 514 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 TPM3P06753 285 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 MMP3P08254 477 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 HOXD10P28358 340 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 SOX10P56693 466 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 ALCAMQ13740 583 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 TARBP2Q15633 366 aaKnown RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 ZC2HC1CQ53FD0 456 aaPredicted RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 TCP11X2Q5H9J9 407 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 FOXR2Q6PJQ5 311 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 SLC17A8Q8NDX2 589 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 IFT74Q96LB3 600 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 CTAGE1Q96RT6 745 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 FIZ1Q96SL8 496 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 AP5M1Q9H0R1 490 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 KCTD10Q9H3F6 313 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 PDLIM7Q9NR12 457 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 ERAP1Q9NZ08 941 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 LIMA1Q9UHB6 759 aaKnown RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 THSD7BQ9C0I4 1608 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 GOLGA6L6A8MZA4 724 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 SLC16A4O15374 487 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 PPFIA4O75335 1185 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 IGHA2P01877 340 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 ZNF286BP0CG31 522 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 EEF1GP26641 437 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms