RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 RTKN2Q8IZC4 609 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 SGSM3Q96HU1 749 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 IER2Q9BTL4 223 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 INCENPQ9NQS7 918 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 GALNT8Q9NY28 637 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 PPARGC1AQ9UBK2 798 aaKnown RBP3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 TELO2Q9Y4R8 837 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 EFCAB5A4FU69 1503 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 ZMYM4Q5VZL5 1548 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 UGGT2Q9NYU1 1516 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 ABCA8O94911 1581 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 C3P01024 1663 aa3.83□□□□□ -1.8
DEPDC4-204ENST00000547823 CAMSAP1Q5T5Y3 1602 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 DENND4BO75064 1496 aaPredicted RBP3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 FHOD3Q2V2M9 1422 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 A0A0G2JNJ9 132 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 IQCA1LA6NCM1 817 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 SMAD7O15105 426 aaKnown RBP3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 NKRFO15226 690 aaKnown RBP eCLIP3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 MSCO60682 206 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 SOD2P04179 222 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 COL6A2P12110 1019 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 HERVK_113P62684 666 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 MRPS21P82921 87 aaKnown RBP3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 CNGB1Q14028 1251 aaPredicted RBP3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 PCOLCEQ15113 449 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 SLC10A6Q3KNW5 377 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 FIGNQ5HY92 759 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 BTBD8Q5XKL5 378 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 TRIM68Q6AZZ1 485 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 STYK1Q6J9G0 422 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 EP400NLQ6ZTU2 488 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 NT5DC4Q86YG4 428 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 RBM12BQ8IXT5 1001 aaKnown RBP3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 SHCBP1Q8NEM2 672 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 WNK4Q96J92 1243 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 KCNJ15Q99712 375 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 BTBD2Q9BX70 525 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 TGIF2Q9GZN2 237 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 KIAA1683Q9H0B3 1180 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 Q9UFV3 132 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 PRKAG3Q9UGI9 489 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 SRPK3Q9UPE1 567 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 INPP5FQ9Y2H2 1132 aa3.82□□□□□ -1.8
DEPDC4-204ENST00000547823 ALKQ9UM73 1620 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 DLX3O60479 287 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 SSBP05455 408 aaKnown RBP eCLIP3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 PTPN1P18031 435 aaKnown RBP3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 NAT1P18440 290 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 MRE11P49959 708 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 SESN2P58004 480 aaPredicted RBP3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 IL13RA1P78552 427 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 COL10A1Q03692 680 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 HGFACQ04756 655 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 RRP1BQ14684 758 aaKnown RBP3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 GPR19Q15760 415 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 TBR1Q16650 682 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 TMEM200BQ69YZ2 307 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 PRIMA1Q86XR5 153 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 VPS37DQ86XT2 251 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 GPR135Q8IZ08 494 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 AARSD1Q9BTE6 412 aaKnown RBP3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 VWA7Q9Y334 891 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 ATP23Q9Y6H3 246 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 SUPT6HQ7KZ85 1726 aaKnown RBP3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 HECW1Q76N89 1606 aa3.81□□□□□ -1.8
DEPDC4-204ENST00000547823 MAGI2Q86UL8 1455 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 B2RBV5 119 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 MAFO75444 373 aaPredicted RBP3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 LMNAP02545 664 aaKnown RBP3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 GCP02774 474 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 FGFR1P11362 822 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 KRT4P19013 534 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 AOAHP28039 575 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 MAN2A2P49641 1150 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 MAP3K12Q12852 859 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 NOLC1Q14978 699 aaKnown RBP eCLIP3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 SYCE2Q6PIF2 218 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 Q6ZPA2 131 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 FILIP1Q7Z7B0 1213 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 SYNE4Q8N205 404 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 RABGGTAQ92696 567 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 HAS1Q92839 578 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 MIEF2Q96C03 454 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 ZNF764Q96H86 408 aaPredicted RBP3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 CCSER2Q9H7U1 834 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 CAPN10Q9HC96 672 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 RIC8BQ9NVN3 520 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 PTGFRNQ9P2B2 879 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 CFAP74Q9C0B2 1584 aa3.8□□□□□ -1.8
DEPDC4-204ENST00000547823 TRAPPC8Q9Y2L5 1435 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 CARMIL1Q5VZK9 1371 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 A0A0A6YYK5 440 aaPredicted RBP3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 A0A1W2PQU0 124 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 UNCXA6NJT0 531 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 WNT9AO14904 365 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 ATF4P18848 351 aaPredicted RBP3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 ADCY8P40145 1251 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 GRIA2P42262 883 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 SMAD3P84022 425 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms