RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 BCL6BQ8N143 479 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-224ENST00000545688 UBXN4Q92575 508 aa7.07□□□□□ -1.28
SNHG1-224ENST00000545688 TMEM260Q9NX78 707 aa7.07□□□□□ -1.28
SNHG1-224ENST00000545688 PUF60Q9UHX1 559 aaKnown RBP7.07□□□□□ -1.28
SNHG1-224ENST00000545688 FAM184BQ9ULE4 1060 aa7.07□□□□□ -1.28
SNHG1-224ENST00000545688 SLC30A1Q9Y6M5 507 aa7.07□□□□□ -1.28
SNHG1-224ENST00000545688 PTPDC1A2A3K4 754 aa7.06□□□□□ -1.28
SNHG1-224ENST00000545688 ASMTLO95671 621 aa7.06□□□□□ -1.28
SNHG1-224ENST00000545688 C6P13671 934 aa7.06□□□□□ -1.28
SNHG1-224ENST00000545688 FNTBP49356 437 aa7.06□□□□□ -1.28
SNHG1-224ENST00000545688 ZNF747Q9BV97 191 aa7.06□□□□□ -1.28
SNHG1-224ENST00000545688 PIF1Q9H611 641 aa7.06□□□□□ -1.28
SNHG1-224ENST00000545688 CABP5Q9NP86 173 aa7.06□□□□□ -1.28
SNHG1-224ENST00000545688 AKAP8O43823 692 aaKnown RBP7.05□□□□□ -1.28
SNHG1-224ENST00000545688 PRLP01236 227 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 TACR2P21452 398 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 RGS3P49796 1198 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 SLC6A3Q01959 620 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 HGFACQ04756 655 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 PRKD1Q15139 912 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-224ENST00000545688 CRIP3Q6Q6R5 217 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 Q6ZSN1 163 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 POLNQ7Z5Q5 900 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 Q8N1X5 172 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 VPS11Q9H270 941 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 PCIF1Q9H4Z3 704 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 MAGEL2Q9UJ55 1249 aa7.05□□□□□ -1.28
SNHG1-224ENST00000545688 CBX4O00257 560 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 FSHBP01225 129 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 AMHP03971 560 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 JMJD7P0C870 316 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 ACO1P21399 889 aaKnown RBP7.04□□□□□ -1.28
SNHG1-224ENST00000545688 MAP3K12Q12852 859 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 PABPC4Q13310 644 aaKnown RBP eCLIP7.04□□□□□ -1.28
SNHG1-224ENST00000545688 GPR135Q8IZ08 494 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 KIAA1958Q8N8K9 716 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 EDAQ92838 391 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 E2F7Q96AV8 911 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 ACSS2Q9NR19 701 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 B4GALT6Q9UBX8 382 aa7.04□□□□□ -1.28
SNHG1-224ENST00000545688 UBA6A0AVT1 1052 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-224ENST00000545688 H7C1D1 291 aa7.03□□□□□ -1.28
SNHG1-224ENST00000545688 RPS19P39019 145 aaKnown RBP7.03□□□□□ -1.28
SNHG1-224ENST00000545688 RANGAP1P46060 587 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-224ENST00000545688 ADAM15Q13444 863 aa7.03□□□□□ -1.28
SNHG1-224ENST00000545688 CDCA2Q69YH5 1023 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-224ENST00000545688 UBE2R2Q712K3 238 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-224ENST00000545688 SLC16A11Q8NCK7 471 aa7.03□□□□□ -1.28
SNHG1-224ENST00000545688 RFPL3O75679 317 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 PTX3P26022 381 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-224ENST00000545688 FLT3P36888 993 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 ROM1Q03395 351 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 FOXL1Q12952 345 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 ZNF174Q15697 407 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 CFAP100Q494V2 611 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 SLFN12LQ6IEE8 588 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 MAMDC4Q6UXC1 1216 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 ZNF808Q8N4W9 903 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-224ENST00000545688 OR5AN1Q8NGI8 311 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 MAML3Q96JK9 1138 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 C16orf92Q96LL3 132 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 RNPC3Q96LT9 517 aaKnown RBP7.02□□□□□ -1.29
SNHG1-224ENST00000545688 SCAND2PQ9GZW5 306 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-224ENST00000545688 MSL2Q9HCI7 577 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 VWA7Q9Y334 891 aa7.02□□□□□ -1.29
SNHG1-224ENST00000545688 CTDP1Q9Y5B0 961 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-224ENST00000545688 SLC26A4O43511 780 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 CYP17A1P05093 508 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 MSX2P35548 267 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-224ENST00000545688 ANTXR2P58335 489 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 C21orf62-AS1Q17RA5 79 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 TTC38Q5R3I4 469 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 CREB3L3Q68CJ9 461 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 KLHDC10Q6PID8 442 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 RNF207Q6ZRF8 634 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 SHCBP1Q8NEM2 672 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 AGO3Q9H9G7 860 aaKnown RBP7.01□□□□□ -1.29
SNHG1-224ENST00000545688 PLA2G3Q9NZ20 509 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 SAE1Q9UBE0 346 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-224ENST00000545688 MAGEC2Q9UBF1 373 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-224ENST00000545688 SRRDQ9UH36 339 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 CD2APQ9Y5K6 639 aa7.01□□□□□ -1.29
SNHG1-224ENST00000545688 SLC9A1P19634 815 aa7□□□□□ -1.29
SNHG1-224ENST00000545688 STAT3P40763 770 aa7□□□□□ -1.29
SNHG1-224ENST00000545688 ACAP1Q15027 740 aa7□□□□□ -1.29
SNHG1-224ENST00000545688 NRN1LQ496H8 165 aa7□□□□□ -1.29
SNHG1-224ENST00000545688 USP39Q53GS9 565 aaKnown RBP7□□□□□ -1.29
SNHG1-224ENST00000545688 PRAMEF9Q5VWM5 478 aa7□□□□□ -1.29
SNHG1-224ENST00000545688 ESRP1Q6NXG1 681 aaKnown RBP7□□□□□ -1.29
SNHG1-224ENST00000545688 FAM89AQ96GI7 184 aa7□□□□□ -1.29
SNHG1-224ENST00000545688 TUBGCP5Q96RT8 1024 aa7□□□□□ -1.29
SNHG1-224ENST00000545688 ELF4Q99607 663 aaPredicted RBP7□□□□□ -1.29
SNHG1-224ENST00000545688 NELFAQ9H3P2 528 aa7□□□□□ -1.29
SNHG1-224ENST00000545688 ATP2C1P98194 919 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-224ENST00000545688 RIN1Q13671 783 aa6.99□□□□□ -1.29
SNHG1-224ENST00000545688 SAFB2Q14151 953 aaKnown RBP eCLIP6.99□□□□□ -1.29
SNHG1-224ENST00000545688 MYBPC3Q14896 1274 aa6.99□□□□□ -1.29
SNHG1-224ENST00000545688 EPHA7Q15375 998 aa6.99□□□□□ -1.29
SNHG1-224ENST00000545688 TCEA2Q15560 299 aa6.99□□□□□ -1.29
SNHG1-224ENST00000545688 DGKDQ16760 1214 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms