RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GVINP1Q7Z2Y8 2422 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 FAM86B1E9PN63 330 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 FAM86B2P0C5J1 330 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 IBSPP21815 317 aaPredicted RBP18.39■□□□□ 0.53
DDX55-212ENST00000544738 FRMD5Q7Z6J6 570 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 CMTR2Q8IYT2 770 aaKnown RBP18.39■□□□□ 0.53
DDX55-212ENST00000544738 ADSSL1Q8N142 457 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 CRYGNQ8WXF5 182 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 NKD2Q969F2 451 aaPredicted RBP18.39■□□□□ 0.53
DDX55-212ENST00000544738 APOL5Q9BWW9 433 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 SLC26A6Q9BXS9 759 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 SH3GLB2Q9NR46 395 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 TBC1D22BQ9NU19 505 aa18.39■□□□□ 0.53
DDX55-212ENST00000544738 IPO5O00410 1097 aaKnown RBP18.38■□□□□ 0.53
DDX55-212ENST00000544738 IGBP1P78318 339 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 SETQ01105 290 aaPredicted RBP18.38■□□□□ 0.53
DDX55-212ENST00000544738 PLCB4Q15147 1175 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 IER5Q5VY09 327 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 FAM160B1Q5W0V3 765 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 TRIM22Q8IYM9 498 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 TMEM105Q8N8V8 129 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 KREMEN2Q8NCW0 462 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 DNAJB3Q8WWF6 145 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 ZNF274Q96GC6 653 aaPredicted RBP18.38■□□□□ 0.53
DDX55-212ENST00000544738 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
DDX55-212ENST00000544738 TTC3P53804 2025 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 IGLV3-22A0A075B6J6 115 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 IGKV6D-21A0A0A0MT36 114 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 CCT2P78371 535 aaKnown RBP18.37■□□□□ 0.53
DDX55-212ENST00000544738 MGAT3Q09327 533 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
DDX55-212ENST00000544738 FBXO47Q5MNV8 452 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
DDX55-212ENST00000544738 ERICH6BQ5W0A0 696 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 ABHD15Q6UXT9 468 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 RTN4RL1Q86UN2 441 aaPredicted RBP18.37■□□□□ 0.53
DDX55-212ENST00000544738 VN1R2Q8NFZ6 395 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 ATP8B4Q8TF62 1192 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 ZNF577Q9BSK1 485 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
DDX55-212ENST00000544738 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 TCEAL9Q9UHQ7 104 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 PCDHA2Q9Y5H9 948 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 SQORQ9Y6N5 450 aa18.37■□□□□ 0.53
DDX55-212ENST00000544738 M0QZ92 97 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 CPLX1O14810 134 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 BACH1O14867 736 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 DHX15O43143 795 aaKnown RBP18.36■□□□□ 0.53
DDX55-212ENST00000544738 CCNE2O96020 404 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 CD52P31358 61 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 CIITAP33076 1130 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 GATMP50440 423 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 MRPS6P82932 125 aaKnown RBP18.36■□□□□ 0.53
DDX55-212ENST00000544738 SSRP1Q08945 709 aaKnown RBP18.36■□□□□ 0.53
DDX55-212ENST00000544738 MIS18BP1Q6P0N0 1132 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 CPLX2Q6PUV4 134 aaKnown RBP18.36■□□□□ 0.53
DDX55-212ENST00000544738 TSHZ1Q6ZSZ6 1077 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 NPAS4Q8IUM7 802 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 LINC01599Q8WXQ3 324 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 AGO3Q9H9G7 860 aaKnown RBP18.36■□□□□ 0.53
DDX55-212ENST00000544738 CDY2AQ9Y6F7 541 aa18.36■□□□□ 0.53
DDX55-212ENST00000544738 DDX39AO00148 427 aaKnown RBP18.35■□□□□ 0.53
DDX55-212ENST00000544738 HBP1O60381 514 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 STAG3L1P0CL83 205 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 TECP42680 631 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 FAM177A1Q8N128 213 aaPredicted RBP18.35■□□□□ 0.53
DDX55-212ENST00000544738 NME8Q8N427 588 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 C22orf23Q9BZE7 217 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 FAM49AQ9H0Q0 323 aaPredicted RBP18.35■□□□□ 0.53
DDX55-212ENST00000544738 S1PR5Q9H228 398 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 ZNF302Q9NR11 478 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 LRFN2Q9ULH4 789 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 PCDHB12Q9Y5F1 795 aa18.35■□□□□ 0.53
DDX55-212ENST00000544738 EP300Q09472 2414 aaPredicted RBP18.35■□□□□ 0.53
DDX55-212ENST00000544738 SMIM35A0A1B0GVV1 85 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 USP11P51784 963 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 NLRP5P59047 1200 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 ERVFC1P60507 584 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 KRT76Q01546 638 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 DUSP6Q16828 381 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 ZNF746Q6NUN9 644 aaPredicted RBP18.34■□□□□ 0.53
DDX55-212ENST00000544738 LLGL2Q6P1M3 1020 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 PDXDC2PQ6P474 469 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 FAM43BQ6ZT52 329 aaPredicted RBP18.34■□□□□ 0.53
DDX55-212ENST00000544738 SMAP1Q8IYB5 467 aaPredicted RBP18.34■□□□□ 0.53
DDX55-212ENST00000544738 UBALD2Q8IYN6 164 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 CDCA3Q99618 268 aaPredicted RBP18.34■□□□□ 0.53
DDX55-212ENST00000544738 VPS54Q9P1Q0 977 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 CACNA1BQ00975 2339 aa18.34■□□□□ 0.53
DDX55-212ENST00000544738 COL1A2P08123 1366 aa18.33■□□□□ 0.53
DDX55-212ENST00000544738 ADAMTS3O15072 1205 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 DEXIO95424 95 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 BRD1O95696 1058 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 PSAPP07602 524 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 SRGAP2BP0DMP2 458 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 MTMR3Q13615 1198 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 PRR16Q569H4 304 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 ZNF484Q5JVG2 852 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 ASTLQ6HA08 431 aaPredicted RBP18.33■□□□□ 0.52
DDX55-212ENST00000544738 SWSAP1Q6NVH7 229 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms